RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 BRD8Q9H0E9 1235 aa15.06■□□□□ 0
TNRC18-210ENST00000497663 MRPL47Q9HD33 250 aaKnown RBP15.06■□□□□ 0
TNRC18-210ENST00000497663 PHPT1Q9NRX4 125 aaPredicted RBP15.06■□□□□ 0
TNRC18-210ENST00000497663 CNOT6Q9ULM6 557 aaKnown RBP15.06■□□□□ 0
TNRC18-210ENST00000497663 CHKBQ9Y259 395 aa15.06■□□□□ 0
TNRC18-210ENST00000497663 PPIL1Q9Y3C6 166 aa15.06■□□□□ 0
TNRC18-210ENST00000497663 OAS3Q9Y6K5 1087 aaKnown RBP15.06■□□□□ 0
TNRC18-210ENST00000497663 HECTD1Q9ULT8 2610 aa15.05■□□□□ 0
TNRC18-210ENST00000497663 INPP4BO15327 924 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 NVLO15381 856 aaKnown RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 SERPINC1P01008 464 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 FGF3P11487 239 aaPredicted RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 GBE1Q04446 702 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 GALNT2Q10471 571 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 EIF3IQ13347 325 aaKnown RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 PIGHQ14442 188 aaPredicted RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 KRT81Q14533 505 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 FIGNQ5HY92 759 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 DTX1Q86Y01 620 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 OR6C4Q8NGE1 309 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 MAML1Q92585 1016 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 RNF31Q96EP0 1072 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 SCARF2Q96GP6 870 aaPredicted RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 CCDC74BQ96LY2 380 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 RIOK2Q9BVS4 552 aaKnown RBP15.05■□□□□ -0
TNRC18-210ENST00000497663 EGFL7Q9UHF1 273 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 ACSL6Q9UKU0 697 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 SPTA1P02549 2419 aa15.05■□□□□ -0
TNRC18-210ENST00000497663 SDK2Q58EX2 2172 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 A0A0J9YYE9 177 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 SYCE3A1L190 88 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 CLDN7O95471 211 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 TRBC1P01850 177 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 ATP1A1P05023 1023 aaKnown RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 HLA-DQB2P05538 268 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 CYP2A6P11509 494 aaPredicted RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 HSPA9P38646 679 aaKnown RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 GARSP41250 739 aaKnown RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 SSR1P43307 286 aaKnown RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 GPR1P46091 355 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 SERPINB4P48594 390 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 ZNF135P52742 658 aaPredicted RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 ITKQ08881 620 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 NR1D2Q14995 579 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 MAP9Q49MG5 647 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 PYCR3Q53H96 274 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 ZNF648Q5T619 568 aaPredicted RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 B4GALNT4Q76KP1 1039 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 AP2M1Q96CW1 435 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 EID2BQ96D98 161 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 TRIM11Q96F44 468 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 MED8Q96G25 268 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 GSDMCQ9BYG8 508 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 RBM22Q9NW64 420 aaKnown RBP eCLIP15.04■□□□□ -0
TNRC18-210ENST00000497663 TRNAU1APQ9NX07 287 aaKnown RBP15.04■□□□□ -0
TNRC18-210ENST00000497663 OCIAD1Q9NX40 245 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 DTLQ9NZJ0 730 aa15.04■□□□□ -0
TNRC18-210ENST00000497663 RHPN2P1A8MT19 583 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 FADS2P1A8MWK0 482 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 B8ZZF3 427 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 TMX2-CTNND1H3BSU7 103 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 J3QKU1 62 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 CPNE6O95741 557 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 GYPCP04921 128 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 SERPING1P05155 500 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 IVLP07476 585 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 MMP2P08253 660 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 FAM87AP0C7U9 286 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 LIPCP11150 499 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 ACTR1BP42025 376 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 STC1P52823 247 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 ACTR1AP61163 376 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 DPTQ07507 201 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 ILF3Q12906 894 aaKnown RBP eCLIP15.03■□□□□ -0
TNRC18-210ENST00000497663 PAFAH1B3Q15102 231 aaKnown RBP15.03■□□□□ -0
TNRC18-210ENST00000497663 NFKBIBQ15653 356 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 ANKRD20A8PQ5CZ79 823 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 ADAMTSL4Q6UY14 1074 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 RAPGEF5Q92565 580 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 COX14Q96I36 57 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 TDRD1Q9BXT4 1180 aaKnown RBP15.03■□□□□ -0
TNRC18-210ENST00000497663 ARFGAP3Q9NP61 516 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 IP6K2Q9UHH9 426 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 TTLL3Q9Y4R7 772 aa15.03■□□□□ -0
TNRC18-210ENST00000497663 SPENQ96T58 3664 aaKnown RBP15.02■□□□□ -0
TNRC18-210ENST00000497663 IGHV1OR21-1A0A087WYE8 117 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 A0A1W2PQJ5 194 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 PSMD11O00231 422 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 PDE2AO00408 941 aaPredicted RBP15.02■□□□□ -0
TNRC18-210ENST00000497663 DNAJC6O75061 913 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 ITGB6P18564 788 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 TEAD1P28347 426 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 ZBTB17Q13105 803 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 CLCA4Q14CN2 919 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 CCDC122Q5T0U0 273 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 ALG1LQ6GMV1 187 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 ALKBH5Q6P6C2 394 aaKnown RBP15.02■□□□□ -0
TNRC18-210ENST00000497663 USP45Q70EL2 814 aa15.02■□□□□ -0
TNRC18-210ENST00000497663 PIM3Q86V86 326 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms