RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 S1PR4O95977 384 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 GLULP15104 373 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 ABCG1P45844 678 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 MAD2L1Q13257 205 aaPredicted RBP8.31□□□□□ -1.08
USP54-215ENST00000497106 NFATC2Q13469 925 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 TYSND1Q2T9J0 566 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 DDIASQ8IXT1 998 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 WBP2Q969T9 261 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 VWCEQ96DN2 955 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 CENPKQ9BS16 269 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 TTC34A8MYJ7 566 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 K7ERQ8 282 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 TP73O15350 636 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 MMP2P08253 660 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 HTR1BP28222 390 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 NTSR1P30989 418 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 DNAJB13P59910 316 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 TRIM68Q6AZZ1 485 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 KIAA1324Q6UXG2 1013 aaKnown RBP8.31□□□□□ -1.08
USP54-215ENST00000497106 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
USP54-215ENST00000497106 OR2T3Q8NH03 318 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 REPS1Q96D71 796 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 SAR1AQ9NR31 198 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 IL1RAPL1Q9NZN1 696 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 DYRK1BQ9Y463 629 aa8.31□□□□□ -1.08
USP54-215ENST00000497106 H0Y858 1186 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 RNASEH2AO75792 299 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 CD9P21926 228 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 FDXRP22570 491 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ACRV1P26436 265 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 MRPS21P82921 87 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 BOP1Q14137 746 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 CHRNA6Q15825 494 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KIF19Q2TAC6 998 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 C10orf107Q8IVU9 208 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 HDDC3Q8N4P3 179 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 PTGR2Q8N8N7 351 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 RHEBL1Q8TAI7 183 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 TADA1Q96BN2 335 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 NXNL1Q96CM4 212 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 CCDC97Q96F63 343 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 OPTCQ9UBM4 332 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 SLCO3A1Q9UIG8 710 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 OR51B4Q9Y5P0 310 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 MUSKO15146 869 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KERAO60938 352 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 MT-CO1P00395 513 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KRT6AP02538 564 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KRT6BP04259 564 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 GJA4P35212 333 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KRT6CP48668 564 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 AQP5P55064 265 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 CCDC6Q16204 474 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 DGKKQ5KSL6 1271 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 PLEKHS1Q5SXH7 462 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 TANGO2Q6ICL3 276 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 VITQ6UXI7 678 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 TRAPPC5Q8IUR0 188 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 UNC5BQ8IZJ1 945 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 PIH1D2Q8WWB5 315 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 SH3KBP1Q96B97 665 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 RRP15Q9Y3B9 282 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 A8MX80 341 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KRT16P08779 473 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 HOXB2P14652 356 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 CCNG1P51959 295 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ADARP55265 1226 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 WDR4P57081 412 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 DCDC1P59894 354 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 SUDS3Q9H7L9 328 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 PCDH12Q9NPG4 1184 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 DNAJC28Q9NX36 388 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 EURLQ9NYK6 297 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 TMEM216Q9P0N5 145 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 THAP10Q9P2Z0 257 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 KCTD3Q9Y597 815 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 SLC16A5O15375 505 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 SMAD6O43541 496 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 PIAS1O75925 651 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 HALP42357 657 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 RGRP47804 291 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ARCN1P48444 511 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 PNLIPRP1P54315 467 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 OCRLQ01968 901 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ART3Q13508 389 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 TSTA3Q13630 321 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 SULT1C3Q6IMI6 304 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 FSTL5Q8N475 847 aaPredicted RBP8.3□□□□□ -1.08
USP54-215ENST00000497106 TTC30BQ8N4P2 665 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 DENND1AQ8TEH3 1009 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 MAPRE3Q9UPY8 281 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 PSAT1Q9Y617 370 aa8.3□□□□□ -1.08
USP54-215ENST00000497106 STON1Q9Y6Q2 735 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms