RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 GRIK2Q13002 908 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 VEPH1Q14D04 833 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 TAF11Q15544 211 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 MAP9Q49MG5 647 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 FAM53AQ6NSI3 398 aaPredicted RBP3.8□□□□□ -1.8
SRRM1-219ENST00000495561 BRINP3Q76B58 766 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 MOGAT3Q86VF5 341 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 WDR20Q8TBZ3 569 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 PIGTQ969N2 578 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 BBS4Q96RK4 519 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 EYA3Q99504 573 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 SH3GL2Q99962 352 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 UBXN6Q9BZV1 441 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 PPP1R3EQ9H7J1 279 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 MAP3K20Q9NYL2 800 aaKnown RBP3.8□□□□□ -1.8
SRRM1-219ENST00000495561 IL1RAPL1Q9NZN1 696 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 PAK5Q9P286 719 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
SRRM1-219ENST00000495561 NOTCH2Q04721 2471 aa3.8□□□□□ -1.8
SRRM1-219ENST00000495561 GCC2Q8IWJ2 1684 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 SYNGR3O43761 229 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 HEXAP06865 529 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 CNPP09543 421 aaKnown RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 SHMT1P34896 483 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 POSTNQ15063 836 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 TCTN1Q2MV58 587 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 TADA2BQ86TJ2 420 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 DHX40Q8IX18 779 aaKnown RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 SPATA6LQ8N4H0 392 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 ZCCHC9Q8N567 271 aaKnown RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 ZBTB2Q8N680 514 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 OR52I2Q8NH67 350 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 ZNF689Q96CS4 500 aaPredicted RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 ART5Q96L15 291 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 PCGF6Q9BYE7 350 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 TAOK3Q9H2K8 898 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 PDZD7Q9H5P4 517 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 GPR108Q9NPR9 543 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 PLCB1Q9NQ66 1216 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 TTC7AQ9ULT0 858 aaPredicted RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 IQGAP3Q86VI3 1631 aa3.79□□□□□ -1.8
SRRM1-219ENST00000495561 XIRP1Q702N8 1843 aaKnown RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 NKTRP30414 1462 aaKnown RBP3.79□□□□□ -1.8
SRRM1-219ENST00000495561 ROBO1Q9Y6N7 1651 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 CLTCL1P53675 1640 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 NWD1Q149M9 1564 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 ZNF821O75541 412 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 MT-CYBP00156 380 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 SP100P23497 879 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 TRIM14Q14142 442 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 OR7E24Q6IFN5 339 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 METTL2BQ6P1Q9 378 aaKnown RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 CCDC174Q6PII3 467 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 TRPT1Q86TN4 253 aaKnown RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 LSM14AQ8ND56 463 aaKnown RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 SPPL3Q8TCT6 385 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 TRAPPC12Q8WVT3 735 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 FCAMRQ8WWV6 532 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 STAMQ92783 540 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 METTL2AQ96IZ6 378 aaKnown RBP3.78□□□□□ -1.8
SRRM1-219ENST00000495561 NEURL2Q9BR09 285 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 FAM167BQ9BTA0 163 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 PAGR1Q9BTK6 254 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 NDST4Q9H3R1 872 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 NOD2Q9HC29 1040 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 BPIFA1Q9NP55 256 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 FAM96BQ9Y3D0 163 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 MYO5BQ9ULV0 1848 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 SRCAPQ6ZRS2 3230 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 HFM1A2PYH4 1435 aa3.78□□□□□ -1.8
SRRM1-219ENST00000495561 LRP6O75581 1613 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 JCADQ9P266 1359 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 TRPM2O94759 1503 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 IGKV6D-41A0A0C4DH26 115 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 CIDEAO60543 219 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 CD48P09326 243 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 ZNF26P17031 533 aaPredicted RBP3.77□□□□□ -1.81
SRRM1-219ENST00000495561 POU1F1P28069 291 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 HOXC8P31273 242 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 KRT9P35527 623 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 CSRP3P50461 194 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 PRKG1Q13976 671 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 ANKRD1Q15327 319 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 TUBB8Q3ZCM7 444 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 HIST2H2BDQ6DRA6 164 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 TTI2Q6NXR4 508 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 RAD9BQ6WBX8 426 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 ADGRG6Q86SQ4 1221 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 FTSJ3Q8IY81 847 aaKnown RBP3.77□□□□□ -1.81
SRRM1-219ENST00000495561 PCDH20Q8N6Y1 951 aaKnown RBP3.77□□□□□ -1.81
SRRM1-219ENST00000495561 USP38Q8NB14 1042 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 RUFY2Q8WXA3 655 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 ZNF653Q96CK0 615 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 LINGO1Q96FE5 620 aa3.77□□□□□ -1.81
SRRM1-219ENST00000495561 WDR13Q9H1Z4 485 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms