RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ALG11Q2TAA5 492 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 INAVAQ3KP66 663 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 BBS9Q3SYG4 887 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 ZNF542PQ5EBM4 170 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 STPG1Q5TH74 334 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 RD3Q7Z3Z2 195 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 TRIM74Q86UV6 250 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 CCNJLQ8IV13 435 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 OR13J1Q8NGT2 312 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 OR2I1PQ8NGU4 316 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 NETO1Q8TDF5 533 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 HDAC10Q969S8 669 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 TSACCQ96A04 125 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-235ENST00000495515 LRRC39Q96DD0 335 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 STAMBPL1Q96FJ0 436 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 UGT1A7Q9HAW7 530 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 UGT1A10Q9HAW8 530 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 UGT1A8Q9HAW9 530 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 CYP4F12Q9HCS2 524 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 FGF22Q9HCT0 170 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 RXFP3Q9NSD7 469 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 APOBEC3BQ9UH17 382 aaKnown RBP16.95■□□□□ 0.3
HDAC6-235ENST00000495515 LRRK1Q38SD2 2015 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 GVINP1Q7Z2Y8 2422 aa16.95■□□□□ 0.3
HDAC6-235ENST00000495515 DOCK9Q9BZ29 2069 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CCDC162PA2VCL2 907 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 NEMP2A6NFY4 417 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CFAP99D6REC4 459 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 GAPDHSO14556 408 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-235ENST00000495515 PIAS2O75928 621 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CEACAM5P06731 702 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SDHBP21912 280 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 NMBRP28336 390 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 ARSDP51689 593 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SLC7A5Q01650 507 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 GUCY2DQ02846 1103 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 AARS2Q5JTZ9 985 aaKnown RBP16.94■□□□□ 0.3
HDAC6-235ENST00000495515 GPRC6AQ5T6X5 926 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 LYPLAL1Q5VWZ2 237 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CENPUQ71F23 418 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 TAS2R42Q7RTR8 314 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 MPP5Q8N3R9 675 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 FSTL5Q8N475 847 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-235ENST00000495515 DDHD1Q8NEL9 900 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 OR4L1Q8NH43 312 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 OR1E3Q8WZA6 343 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 DCUN1D1Q96GG9 259 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SGSM3Q96HU1 749 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SIGLEC10Q96LC7 697 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 ZNF778Q96MU6 729 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 FAM129AQ9BZQ8 928 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 FOXP3Q9BZS1 431 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SUDS3Q9H7L9 328 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
HDAC6-235ENST00000495515 FAM114A2Q9NRY5 505 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 SLC2A6Q9UGQ3 507 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 TMEM98Q9Y2Y6 226 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 RPS6KL1Q9Y6S9 549 aa16.94■□□□□ 0.3
HDAC6-235ENST00000495515 CFAP54Q96N23 3096 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 PCDH15Q96QU1 1955 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 PI4KAP42356 2102 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 AGAP14A8MT82 685 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 GDF9O60383 454 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 USP1O94782 785 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 CDK14O94921 469 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 TTC4O95801 387 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 GOT2P00505 430 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 POLBP06746 335 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 PGAM1P18669 254 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 MSH3P20585 1137 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 AKT1P31749 480 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 PLTPP55058 493 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 DHX9Q08211 1270 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 ELOCQ15369 112 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 FASTKD1Q53R41 847 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 FNBP1LQ5T0N5 605 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 KIAA0930Q6ICG6 404 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 CERS6Q6ZMG9 384 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 TMEM135Q86UB9 458 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 GALNT13Q8IUC8 556 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 NXPE1Q8N323 547 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 SDR16C5Q8N3Y7 309 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 ART4Q93070 314 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 ZNF669Q96BR6 464 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 MFSD3Q96ES6 412 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 PDXPQ96GD0 296 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 SCARF2Q96GP6 870 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 COPS8Q99627 209 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 EBNA1BP2Q99848 306 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 OR2AG1Q9H205 316 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 TRNAU1APQ9NX07 287 aaKnown RBP16.93■□□□□ 0.3
HDAC6-235ENST00000495515 GRHL1Q9NZI5 618 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 ATXN10Q9UBB4 475 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
HDAC6-235ENST00000495515 OAS3Q9Y6K5 1087 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms