RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CDK17Q00537 523 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 PYCR3Q53H96 274 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 B3GNTL1Q67FW5 361 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 ERAP2Q6P179 960 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 CHST15Q7LFX5 561 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 PRSS42Q7Z5A4 293 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 PPP1R32Q7Z5V6 425 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 RAB43Q86YS6 212 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 UBR7Q8N806 425 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 CA5BP1Q8WTZ4 195 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 KAT5Q92993 513 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 GDAP1L1Q96MZ0 367 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 MESP1Q9BRJ9 268 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 MAGEB5Q9BZ81 275 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 LHX3Q9UBR4 397 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 DNAI1Q9UI46 699 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 RYR3Q15413 4870 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 CNOT3O75175 753 aaKnown RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CTAG2O75638 210 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 KLHL18O94889 574 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 ZNF202O95125 648 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SLC2A3P11169 496 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 RORAP35398 523 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 ETV3P41162 512 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CXCR3P49682 368 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 RHOAP61586 193 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SNRPFP62306 86 aaKnown RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 HMGN5P82970 282 aaKnown RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 TFF3Q07654 80 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 DMPKQ09013 629 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CUL2Q13617 745 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SLC9A5Q14940 896 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 NCF4Q15080 339 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 TLR1Q15399 786 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 TMEM270Q6UE05 265 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 IGFL2Q6UWQ7 119 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SYTL1Q8IYJ3 562 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 AMER2Q8N7J2 671 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CCDC150Q8NCX0 1101 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 NUS1Q96E22 293 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 ZNF514Q96K75 400 aaPredicted RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 COX4I2Q96KJ9 171 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 HSFY1Q96LI6 401 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 FER1L6-AS2Q96M78 137 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 NSMCE3Q96MG7 304 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 PPM1MQ96MI6 270 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 PLEKHG4BQ96PX9 1271 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 LLPHQ9BRT6 129 aaKnown RBP8.71□□□□□ -1.02
GARNL3-219ENST00000495172 SUV39H2Q9H5I1 410 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 PCMTD2Q9NV79 361 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 CD84Q9UIB8 345 aa8.71□□□□□ -1.02
GARNL3-219ENST00000495172 TSPAN11A1L157 253 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 LILRA5A6NI73 299 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 PDE2AO00408 941 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 BUB1O43683 1085 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 CRLF1O75462 422 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 IGSF6O95976 241 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 TPOP07202 933 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 KLK3P07288 261 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 ACP5P13686 325 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 MSX1P28360 303 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 GPD2P43304 727 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 RGRP47804 291 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 UBE2IP63279 158 aaKnown RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 CEBPZQ03701 1054 aaKnown RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 PCOLCEQ15113 449 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 CNGA2Q16280 664 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 DEFB113Q30KQ7 82 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 PLA2G4EQ3MJ16 856 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 MLIPQ5VWP3 458 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 CES4AQ5XG92 561 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 FCRL6Q6DN72 434 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 RAET1GQ6H3X3 334 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 CCDC73Q6ZRK6 1079 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 HSD11B1LQ7Z5J1 315 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 SLC9B2Q86UD5 537 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 TMEM158Q8WZ71 300 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 SNX21Q969T3 373 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 RMND5BQ96G75 393 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 SLC41A2Q96JW4 573 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 COQ10AQ96MF6 247 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 AGAP2Q99490 1192 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 MAP3K3Q99759 626 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 TMEM8AQ9HCN3 771 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 SLC6A20Q9NP91 592 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 RAB20Q9NX57 234 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 PPP4R2Q9NY27 417 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 SIK3Q9Y2K2 1263 aa8.7□□□□□ -1.02
GARNL3-219ENST00000495172 PTRH2Q9Y3E5 179 aaKnown RBP8.7□□□□□ -1.02
GARNL3-219ENST00000495172 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms