RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ATP13A3Q9H7F0 1226 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 IGSF5Q9NSI5 407 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 NCKIPSDQ9NZQ3 722 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 MARK1Q9P0L2 795 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 TMCO1Q9UM00 188 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 HS3ST2Q9Y278 367 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 SPO11Q9Y5K1 396 aa16.19■□□□□ 0.18
CBX4-204ENST00000495122 SDK1Q7Z5N4 2213 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 CHURC1-FNTBB4DL54 471 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 FCHO1O14526 889 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 GJB3O75712 270 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 PYGLP06737 847 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 SBK3P0C264 359 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 SAT1P21673 171 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 FNTBP49356 437 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 VASPP50552 380 aaPredicted RBP16.18■□□□□ 0.18
CBX4-204ENST00000495122 EPHB1P54762 984 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 SNRPD1P62314 119 aaKnown RBP16.18■□□□□ 0.18
CBX4-204ENST00000495122 NFKB2Q00653 900 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 BCL2L1Q07817 233 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 RBM20Q5T481 1227 aaKnown RBP16.18■□□□□ 0.18
CBX4-204ENST00000495122 CERS6Q6ZMG9 384 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 ERMP1Q7Z2K6 904 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 AFAP1L2Q8N4X5 818 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 OR4K2Q8NGD2 314 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 OR13C4Q8NGS5 318 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 RHEBL1Q8TAI7 183 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 HEXDCQ8WVB3 486 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 OSCP1Q8WVF1 389 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 NXNL1Q96CM4 212 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 CNDP1Q96KN2 507 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 EXOC2Q96KP1 924 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 TTC1Q99614 292 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 OLFM1Q99784 485 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 MARCH4Q9P2E8 410 aaPredicted RBP16.18■□□□□ 0.18
CBX4-204ENST00000495122 PKP3Q9Y446 797 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 KCTD3Q9Y597 815 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 WNT6Q9Y6F9 365 aa16.18■□□□□ 0.18
CBX4-204ENST00000495122 TK2O00142 265 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 SLC22A2O15244 555 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 ITM2AO43736 263 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 SERPINA4P29622 427 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 GJA4P35212 333 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 HMGCLP35914 325 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 MNAT1P51948 309 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 ATP6V0D1P61421 351 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 FOXK2Q01167 660 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 EML3Q32P44 896 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 CFAP157Q5JU67 520 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 LYPLAL1Q5VWZ2 237 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 CYB5D1Q6P9G0 228 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 LINGO4Q6UY18 593 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 CPA6Q8N4T0 437 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 PCDH20Q8N6Y1 951 aaKnown RBP16.17■□□□□ 0.18
CBX4-204ENST00000495122 MDGA1Q8NFP4 955 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 WFDC5Q8TCV5 224 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 LPGAT1Q92604 370 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 PTCD3Q96EY7 689 aaKnown RBP16.17■□□□□ 0.18
CBX4-204ENST00000495122 NSMCE3Q96MG7 304 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 LYSMD1Q96S90 227 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 CPEB1Q9BZB8 566 aaKnown RBP16.17■□□□□ 0.18
CBX4-204ENST00000495122 C20orf27Q9GZN8 174 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 EML4Q9HC35 981 aaKnown RBP16.17■□□□□ 0.18
CBX4-204ENST00000495122 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
CBX4-204ENST00000495122 TAS2R13Q9NYV9 303 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 SLC25A13Q9UJS0 675 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 ZNF711Q9Y462 761 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 PCDHGC4Q9Y5F7 938 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 ACTL7AQ9Y615 435 aa16.17■□□□□ 0.18
CBX4-204ENST00000495122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 AURKAO14965 403 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 MGRN1O60291 552 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 DLX3O60479 287 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 NDUFS3O75489 264 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 LYPLA1O75608 230 aaPredicted RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 EGFP01133 1207 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 PDHA1P08559 390 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 CCDC166P0CW27 439 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 T-ENOLP0DO92 83 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 HOXA6P31267 233 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 PTGER3P43115 390 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 RPL14P50914 215 aaKnown RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 ELF3P78545 371 aaPredicted RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 CACNG1Q06432 222 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 RAD51Q06609 339 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 GRSF1Q12849 480 aaKnown RBP eCLIP16.16■□□□□ 0.18
CBX4-204ENST00000495122 DLG1Q12959 904 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 ZDHHC20Q5W0Z9 365 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 NAIF1Q69YI7 327 aaPredicted RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 LAIR1Q6GTX8 287 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 APCDD1Q8J025 514 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 ARHGAP24Q8N264 748 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 CBARPQ8N350 705 aaPredicted RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 NKAPQ8N5F7 415 aaKnown RBP16.16■□□□□ 0.18
CBX4-204ENST00000495122 OR2AP1Q8NGE2 309 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 PIH1D2Q8WWB5 315 aa16.16■□□□□ 0.18
CBX4-204ENST00000495122 RILPQ96NA2 401 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms