RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SEPT6Q14141 434 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 PTPRCAPQ14761 206 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 HES3Q5TGS1 186 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 C4orf22Q6V702 233 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 CHST15Q7LFX5 561 aaPredicted RBP15.78■□□□□ 0.12
LIME1-209ENST00000494776 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 ZDHHC1Q8WTX9 485 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 VPS35Q96QK1 796 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 OSBPL9Q96SU4 736 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 PIH1D1Q9NWS0 290 aaKnown RBP15.78■□□□□ 0.12
LIME1-209ENST00000494776 TAAR2Q9P1P5 351 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 APPL1Q9UKG1 709 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 PLEKHM1Q9Y4G2 1056 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 KCTD3Q9Y597 815 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 LRP4O75096 1905 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 CACNA1BQ00975 2339 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 EPG5Q9HCE0 2579 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 GPR89AB7ZAQ6 455 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 PGRMC1O00264 195 aaKnown RBP15.77■□□□□ 0.12
LIME1-209ENST00000494776 GRID2O43424 1007 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 NUAK1O60285 661 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A9O60656 530 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 MTX2O75431 263 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 APRTP07741 180 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 GPR89BP0CG08 455 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 ZNF8P17098 575 aaPredicted RBP15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A6P19224 532 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A1P22309 533 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A4P22310 534 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A3P35503 534 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A5P35504 534 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 HADHAP40939 763 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 CLDN6P56747 220 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 GNG11P61952 73 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 TMPRSS15P98073 1019 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 ST3GAL2Q16842 350 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 OGFOD3Q6PK18 319 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 ADGRG6Q86SQ4 1221 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 NRROSQ86YC3 692 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 PRELID2Q8N945 189 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 OR6C4Q8NGE1 309 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 ZNF398Q8TD17 642 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 MAGOHBQ96A72 148 aaKnown RBP15.77■□□□□ 0.12
LIME1-209ENST00000494776 AP1M1Q9BXS5 423 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 SYNDIG1Q9H7V2 258 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A7Q9HAW7 530 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A10Q9HAW8 530 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 UGT1A8Q9HAW9 530 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 SPATS2LQ9NUQ6 558 aaKnown RBP15.77■□□□□ 0.12
LIME1-209ENST00000494776 FKBPLQ9UIM3 349 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 SNX12Q9UMY4 172 aa15.77■□□□□ 0.12
LIME1-209ENST00000494776 ARID1BQ8NFD5 2236 aaPredicted RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 CHD8Q9HCK8 2581 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 VEGFDO43915 354 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 OPA1O60313 960 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 CDK14O94921 469 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 PRAMEF1O95521 474 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 ACP5P13686 325 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 BASP1P80723 227 aaKnown RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 INSM1Q01101 510 aaPredicted RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 CDH17Q12864 832 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 SEMA5AQ13591 1074 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 POU6F1Q14863 301 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 C14orf28Q4W4Y0 310 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 PERM1Q5SV97 790 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 LDLRAP1Q5SW96 308 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 CRTC3Q6UUV7 619 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 CCNI2Q6ZMN8 369 aaPredicted RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 MARCH9Q86YJ5 346 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 GLIS1Q8NBF1 620 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 GPR156Q8NFN8 814 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 OR52K1Q8NGK4 314 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 OR13C4Q8NGS5 318 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 DTX3LQ8TDB6 740 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 COG1Q8WTW3 980 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 CCDC3Q9BQI4 270 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 ZCCHC2Q9C0B9 1178 aaKnown RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 ASB8Q9H765 288 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 TTC7AQ9ULT0 858 aaPredicted RBP15.76■□□□□ 0.11
LIME1-209ENST00000494776 CLCA2Q9UQC9 943 aa15.76■□□□□ 0.11
LIME1-209ENST00000494776 GOLGA6L10A0A0M3HER8 536 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 FAM221BA6H8Z2 402 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 NOBOXO60393 691 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 SRP72O76094 671 aaKnown RBP15.75■□□□□ 0.11
LIME1-209ENST00000494776 MT-CO3P00414 261 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 ZNF140P52738 457 aaPredicted RBP15.75■□□□□ 0.11
LIME1-209ENST00000494776 TMEM115Q12893 351 aaPredicted RBP15.75■□□□□ 0.11
LIME1-209ENST00000494776 MSLNQ13421 630 aaPredicted RBP15.75■□□□□ 0.11
LIME1-209ENST00000494776 INSCQ1MX18 579 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 LRRTM4Q86VH4 590 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 ACTRT1Q8TDG2 376 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 CCDC74AQ96AQ1 378 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 SMARCAL1Q9NZC9 954 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 LRIT1Q9P2V4 623 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 TMPRSS11EQ9UL52 423 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 KCNK6Q9Y257 313 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 SLC30A1Q9Y6M5 507 aa15.75■□□□□ 0.11
LIME1-209ENST00000494776 RHPN2P1A8MT19 583 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 CES2O00748 559 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms