RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TNFP01375 233 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 FUCA1P04066 466 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 GM2AP17900 193 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 GALNT2Q10471 571 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 HLTFQ14527 1009 aaKnown RBP eCLIP11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 OASLQ15646 514 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 NKAIN2Q5VXU1 208 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 LVRNQ6Q4G3 990 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 BBOF1Q8ND07 529 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 WDR92Q96MX6 357 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 PPP1R2P1Q96PQ5 205 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 VAT1Q99536 393 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 SEMA3CQ99985 751 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 HERPUD2Q9BSE4 406 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 SLC12A9Q9BXP2 914 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 MAGEH1Q9H213 219 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 DPEP2Q9H4A9 486 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 ZNF71Q9NQZ8 489 aaPredicted RBP11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 TMEM9Q9P0T7 183 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 MOSPD1Q9UJG1 213 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 DNPEPQ9ULA0 475 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 R3HDM2Q9Y2K5 976 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 ST14Q9Y5Y6 855 aa11.72□□□□□ -0.53
CSNK1E-212ENST00000494610 J3KR12 359 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 SMAPO00193 183 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PPFIA2O75334 1257 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 IGSF6O95976 241 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 FGF3P11487 239 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 LIFP15018 202 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 GLB1P16278 677 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 XPAP23025 273 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 ALDH4A1P30038 563 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 GARSP41250 739 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 BLKP51451 505 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 GEMIN4P57678 1058 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 GBE1Q04446 702 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 SNX1Q13596 522 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PTK6Q13882 451 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PRKD1Q15139 912 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PTPRRQ15256 657 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 UGP2Q16851 508 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 P3H1Q32P28 736 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 C14orf28Q4W4Y0 310 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 NRROSQ86YC3 692 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 BBS5Q8N3I7 341 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 NOA1Q8NC60 698 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 FATE1Q969F0 183 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 NKD1Q969G9 470 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 C1QTNF7Q9BXJ2 289 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 GEMIN8Q9NWZ8 242 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 SEPT10Q9P0V9 454 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 AMACRQ9UHK6 382 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 HPCAL4Q9UM19 191 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 PLEKHM1Q9Y4G2 1056 aa11.71□□□□□ -0.53
CSNK1E-212ENST00000494610 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 IGHV5-10-1A0A0J9YXX1 117 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CXorf51AA0A1B0GTR3 108 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ZSCAN5CA6NGD5 496 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 RASA4BC9J798 803 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 TMX2-CTNND1H3BSU7 103 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 DFFAO00273 331 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 NKX2-8O15522 239 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 RASA4O43374 803 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 RAD51CO43502 376 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 DUX1O43812 170 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 RECQL5O94762 991 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CCNCP24863 283 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 AK4P27144 223 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 HTR1BP28222 390 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 POLE2P56282 527 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 RALGDSQ12967 914 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CALCOCO2Q13137 446 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CUL1Q13616 776 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ARHGEF7Q14155 803 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 UBAP2LQ14157 1087 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 AFMIDQ63HM1 303 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 ITPRIPL1Q6GPH6 555 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 NPNTQ6UXI9 565 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 IFT20Q8IY31 132 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 CCDC13Q8IYE1 715 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 NPWQ8N729 165 aa11.7□□□□□ -0.54
CSNK1E-212ENST00000494610 EIF1ADQ8N9N8 165 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms