RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ZACNQ401N2 412 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 C1orf220Q5T0J3 134 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 ATXN7L2Q5T6C5 722 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 IL27RAQ6UWB1 636 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 GLRX5Q86SX6 157 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 UNC93AQ86WB7 457 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 C12orf56Q8IXR9 622 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 Q8TCH9 128 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 BRIX1Q8TDN6 353 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 BIRC7Q96CA5 298 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 MYOCQ99972 504 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 NDC1Q9BTX1 674 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PACSIN1Q9BY11 444 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 DUSP16Q9BY84 665 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 ZSCAN16Q9H4T2 348 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 MMRN2Q9H8L6 949 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 UPF2Q9HAU5 1272 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 APOBEC3GQ9HC16 384 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 DMAC2Q9NW81 257 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CGNQ9P2M7 1197 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CPNE7Q9UBL6 633 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 RASAL2Q9UJF2 1139 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PADI4Q9UM07 663 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 SLC27A6Q9Y2P4 619 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 MED16Q9Y2X0 877 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 DOCK9Q9BZ29 2069 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PVALEFA0A1B0GWK0 134 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 A0A1W2PPC4 97 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TCRBV7S2A1N4TA0A589 114 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 POM121BA6NF01 834 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 FAM47DPA6NHR8 397 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 IKBKBO14920 756 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 FLRT2O43155 660 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TNFSF14O43557 240 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TIMM44O43615 452 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 KLRC4O43908 158 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PPP6R2O75170 966 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 NR3C1P04150 777 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF883P0CG24 379 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 BRAFP15056 766 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TYRP1P17643 537 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ABCB4P21439 1286 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ITPKBP27987 946 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SLC6A4P31645 630 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ME1P48163 572 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 GCLMP48507 274 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PIK3CGP48736 1102 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 VAMP7P51809 220 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SOX8P57073 446 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 BTKQ06187 659 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PMS2P11Q13670 270 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 DAG1Q14118 895 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 FAM209BQ5JX69 171 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 DHRS13Q6UX07 377 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SERPINA13PQ6UXR4 307 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 CHST9Q7L1S5 443 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 RSRC2Q7L4I2 434 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ANKS1BQ7Z6G8 1248 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 GATAD2AQ86YP4 633 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 LIX1LQ8IVB5 337 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 OR2T3Q8NH03 318 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TAS1R2Q8TE23 839 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 GANCQ8TET4 914 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TAF4BQ92750 862 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TMA16Q96EY4 203 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF396Q96N95 335 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SELENOOQ9BVL4 669 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 CPEB1Q9BZB8 566 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 DCLK3Q9C098 648 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 CUEDC2Q9H467 287 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SMURF2Q9HAU4 748 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TM9SF3Q9HD45 589 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PRSS16Q9NQE7 514 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PLA2G4CQ9UP65 541 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF510Q9Y2H8 683 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 NFE2L3Q9Y4A8 694 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PCDHGB2Q9Y5G2 931 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 SNX13Q9Y5W8 968 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 LOC400499M0QZD8 3231 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 TDRD6O60522 2096 aaKnown RBP5.33□□□□□ -1.56
PTCD3-219ENST00000494323 MYLKQ15746 1914 aa5.33□□□□□ -1.56
PTCD3-219ENST00000494323 PTPRQQ9UMZ3 2332 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 UBE4BO95155 1302 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 GOLGA6L7A0A1B0GV03 622 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 CCDC189A1A4V9 331 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 GOLGA6L6A8MZA4 724 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TULP2O00295 520 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PLK4O00444 970 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PDXKO00764 312 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 NPC1O15118 1278 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SLC43A1O75387 559 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms