RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 K7ESM1 405 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 PYGLP06737 847 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 KRT15P19012 456 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 ATP5DP30049 168 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 CD6P30203 668 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 PTGER3P43115 390 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 SGCGQ13326 291 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 ITIH4Q14624 930 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 WSCD2Q2TBF2 565 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 HSP90B2PQ58FF3 399 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 GPRC6AQ5T6X5 926 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 MROH9Q5TGP6 573 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 RAET1GQ6H3X3 334 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 RBFAQ8N0V3 343 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 PELI3Q8N2H9 469 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 ASB12Q8WXK4 309 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 TLCD1Q96CP7 247 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 TOE1Q96GM8 510 aaKnown RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 COPS8Q99627 209 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 C1QTNF7Q9BXJ2 289 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
MCF2L-231ENST00000494043 WSB2Q9NYS7 404 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
MCF2L-231ENST00000494043 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 IGLV3-16A0A075B6K0 115 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 FAM95CA0A1B0GW59 222 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 FOXO6A8MYZ6 492 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 H3BQF6 201 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PRMT5O14744 637 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 LATO43561 262 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 OR1I1O60431 355 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PCCBP05166 539 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 TEAD1P28347 426 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 HOXA6P31267 233 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 GPR1P46091 355 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 SERPINB8P50452 374 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 CCR5P51681 352 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 LRRC14Q15048 493 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 IRF4Q15306 451 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 LDLRAP1Q5SW96 308 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 RBM20Q5T481 1227 aaKnown RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PNCKQ6P2M8 343 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ADAMTSL4Q6UY14 1074 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 TIFABQ6ZNK6 161 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 TRABD2AQ86V40 505 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PHYKPLQ8IUZ5 450 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PLA2G15Q8NCC3 412 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 DDHD1Q8NEL9 900 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ACVR1CQ8NER5 493 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 BTN2A2Q8WVV5 523 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 RLN3Q8WXF3 142 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 KLK6Q92876 244 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ISL2Q96A47 359 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 CCDC97Q96F63 343 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 ELMO2Q96JJ3 720 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 BOCQ9BWV1 1114 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 CLPBQ9H078 707 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 P2RY12Q9H244 342 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 PRMT8Q9NR22 394 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 CNOT6Q9ULM6 557 aaKnown RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
MCF2L-231ENST00000494043 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
MCF2L-231ENST00000494043 NUMA1Q14980 2115 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 TPP1O14773 563 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 AXIN1O15169 862 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 RAD51BO15315 384 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 INPP4BO15327 924 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 RFPL1O75677 317 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-231ENST00000494043 ESR1P03372 595 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 MT-ND3P03897 115 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
MCF2L-231ENST00000494043 FMO4P31512 558 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 AKT1P31749 480 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 IGFALSP35858 605 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 NSG1P42857 185 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 MAGEA12P43365 314 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 POLD2P49005 469 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
MCF2L-231ENST00000494043 B4GALNT1Q00973 533 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 POU4F1Q01851 419 aa11.29□□□□□ -0.6
MCF2L-231ENST00000494043 USP10Q14694 798 aaKnown RBP11.29□□□□□ -0.6
MCF2L-231ENST00000494043 CTSL3PQ5NE16 218 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms