RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 GPR180Q86V85 440 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 METTL27Q8N6F8 245 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-216ENST00000493758 FRMD1Q8N878 549 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 SLC38A9Q8NBW4 561 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 ACVR1CQ8NER5 493 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 OR1J2Q8NGS2 313 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 SLC38A5Q8WUX1 472 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 STK39Q9UEW8 545 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 RALYQ9UKM9 306 aaKnown RBP4.14□□□□□ -1.75
ITGB1-216ENST00000493758 OR2W1Q9Y3N9 320 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 ZNF711Q9Y462 761 aa4.14□□□□□ -1.75
ITGB1-216ENST00000493758 ATP2A1O14983 1001 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 ANKRD28O15084 1053 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 ZNHIT1O43257 154 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 PDE9AO76083 593 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 MBD4O95243 580 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 SPARCP09486 303 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 ACTN1P12814 892 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 IL7RP16871 459 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 POLR2CP19387 275 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-216ENST00000493758 PRCPP42785 496 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 LRMPQ12912 555 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 RBBP5Q15291 538 aaKnown RBP4.13□□□□□ -1.75
ITGB1-216ENST00000493758 CCDC6Q16204 474 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 STPG1Q5TH74 334 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 TMEM255BQ8WV15 326 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 SCRN2Q96FV2 425 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 C1orf74Q96LT6 269 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 POLR1BQ9H9Y6 1135 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 LRRC4Q9HBW1 653 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 SDF2L1Q9HCN8 221 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 DIAPH3Q9NSV4 1193 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 CNOT8Q9UFF9 292 aaKnown RBP4.13□□□□□ -1.75
ITGB1-216ENST00000493758 PIAS3Q9Y6X2 628 aa4.13□□□□□ -1.75
ITGB1-216ENST00000493758 FAM72CH0Y354 149 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 C16orf97H3BN30 126 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 EPB41L2O43491 1005 aaKnown RBP4.12□□□□□ -1.75
ITGB1-216ENST00000493758 BUD23O43709 281 aaKnown RBP4.12□□□□□ -1.75
ITGB1-216ENST00000493758 FGF17O60258 216 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 IGHV4-39P01824 125 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 CRYAAP02489 173 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 PAX1P15863 534 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 TM4SF1P30408 202 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 HOXA13P31271 388 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-216ENST00000493758 AHRP35869 848 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 SREBF2Q12772 1141 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 FAM72AQ5TYM5 149 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 FAM72DQ6L9T8 149 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 MARK2Q7KZI7 788 aaKnown RBP4.12□□□□□ -1.75
ITGB1-216ENST00000493758 SLC9B2Q86UD5 537 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 FAM72BQ86X60 149 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 MPP4Q96JB8 637 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 EGLN2Q96KS0 407 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 PCYT2Q99447 389 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 TMEM39BQ9GZU3 492 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 ZNF334Q9HCZ1 680 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-216ENST00000493758 POLG2Q9UHN1 485 aa4.12□□□□□ -1.75
ITGB1-216ENST00000493758 CDRT15L2A8MXV6 281 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 CAPN9O14815 690 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 SMAD9O15198 467 aaKnown RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 LMX1BO60663 402 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 KCNA5P22460 613 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 TIMP3P35625 211 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 CLCN3P51790 818 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 DCAF7P61962 342 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 PHEXP78562 749 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 MVPQ14764 893 aaKnown RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 TMEM35AQ53FP2 167 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 GPATCH4Q5T3I0 446 aaKnown RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 IRAK1BP1Q5VVH5 260 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 SNX30Q5VWJ9 437 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 PMS2CLQ68D20 193 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 PLEKHM3Q6ZWE6 761 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 PM20D2Q8IYS1 436 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 CIARTQ8N365 385 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 CCDC34Q96HJ3 373 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 PGLYRP2Q96PD5 576 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 EPB41L5Q9HCM4 733 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 OLA1Q9NTK5 396 aaKnown RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 MTMR10Q9NXD2 777 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 TRMT1Q9NXH9 659 aaKnown RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 ORC3Q9UBD5 711 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-216ENST00000493758 COPG2Q9UBF2 871 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 MTMR6Q9Y217 621 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 TCF19Q9Y242 345 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 KLHL20Q9Y2M5 609 aa4.11□□□□□ -1.75
ITGB1-216ENST00000493758 FAM237BA0A1B0GVD1 139 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 C1orf226A1L170 272 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 OR5K3A6NET4 321 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 PGPEP1LA6NFU8 196 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 EIF4E1BA6NMX2 242 aaKnown RBP4.1□□□□□ -1.75
ITGB1-216ENST00000493758 ANKRD66B4E2M5 251 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 ICAM1P05362 532 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 GM2AP17900 193 aa4.1□□□□□ -1.75
ITGB1-216ENST00000493758 FMO5P49326 533 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms