RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 CNTN4Q8IWV2 1026 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GSPT2Q8IYD1 628 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 FRMD1Q8N878 549 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 TMEM145Q8NBT3 493 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 ANKK1Q8NFD2 765 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 BTN2A2Q8WVV5 523 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GLYATL1Q969I3 302 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 HIC2Q96JB3 615 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 LOXL4Q96JB6 756 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 PPANQ9NQ55 473 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 INTS10Q9NVR2 710 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 ZFATQ9P243 1243 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 CRLS1Q9UJA2 301 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 FNDC3AQ9Y2H6 1198 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 FAM159BA6NKW6 160 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 CACNB4O00305 520 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 QSOX1O00391 747 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 GAPDHSO14556 408 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 RIPK2O43353 540 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ACSL3O95573 720 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 PCCBP05166 539 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ARNTP27540 789 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 HTR1BP28222 390 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 SSTR1P30872 391 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 KIAA1024LP59773 190 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 PTK2BQ14289 1009 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 INPP5AQ14642 412 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 TEAD4Q15561 434 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ATP13A5Q4VNC0 1218 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 HSP90AA5PQ58FG0 334 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 KYAT3Q6YP21 454 aaKnown RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 RFLNAQ6ZTI6 216 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 LRRC6Q86X45 466 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 TMEFF1Q8IYR6 380 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 RGL4Q8IZJ4 473 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 NXPE1Q8N323 547 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 MFSD2AQ8NA29 543 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 DDHD1Q8NEL9 900 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 UBLCP1Q8WVY7 318 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 KLK6Q92876 244 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 DCUN1D1Q96GG9 259 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 COPS8Q99627 209 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 TEX101Q9BY14 249 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ACSS3Q9H6R3 686 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 SUDS3Q9H7L9 328 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 PLAC1Q9HBJ0 212 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 MBNL1Q9NR56 388 aaKnown RBP12.33□□□□□ -0.44
SNX17-208ENST00000493711 AASDHPPTQ9NRN7 309 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 FAM86C1Q9NVL1 165 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 ZDHHC3Q9NYG2 299 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 FETUBQ9UGM5 382 aa12.33□□□□□ -0.44
SNX17-208ENST00000493711 CCL22O00626 93 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 VEGFDO43915 354 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 NDUFS3O75489 264 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 SLC25A14O95258 325 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 IVLP07476 585 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 MYCLP1P12525 358 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 ACRV1P26436 265 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 IGFALSP35858 605 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 PTGER3P43115 390 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 AFF3P51826 1226 aaKnown RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 ADARP55265 1226 aaKnown RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 PFN3P60673 137 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 GTF2H3Q13889 308 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 TYSND1Q2T9J0 566 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 ZNF470Q6ECI4 717 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 PACS1Q6VY07 963 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 CROCCP2Q86T23 111 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 LAPTM4BQ86VI4 370 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 SERPINA9Q86WD7 417 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 SLC41A1Q8IVJ1 513 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 GDAP1Q8TB36 358 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 ZNF514Q96K75 400 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 PKNOX2Q96KN3 472 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 TRIM56Q9BRZ2 755 aaKnown RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 RMI1Q9H9A7 625 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 TRIM39Q9HCM9 518 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 IARS2Q9NSE4 1012 aaKnown RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 VPS18Q9P253 973 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms