RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 LRP4O75096 1905 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 PCNX2A6NKB5 2137 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CNOT1A5YKK6 2376 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 MAGEB16A2A368 324 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CCDC78A2IDD5 438 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CTAGE15A4D2H0 777 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 FAM187AA6NFU0 413 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TMEM202A6NGA9 273 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GOLGA8MH3BSY2 632 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DNALI1O14645 258 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SCAMP1O15126 338 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 KMOO15229 486 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TTI1O43156 1089 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GRID2O43424 1007 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 VEGFDO43915 354 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SRP72O76094 671 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 IVLP07476 585 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CTAGE8P0CG41 777 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 MLNP12872 115 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CEACAM1P13688 526 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SLC2A4P14672 509 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GM2AP17900 193 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 PMLP29590 882 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 C2orf54Q08AI8 447 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 EIF2B5Q13144 721 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 C1orf61Q13536 156 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 LRP8Q14114 963 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TCEA2Q15560 299 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRIP6Q15654 476 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CHRNA6Q15825 494 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 INSCQ1MX18 579 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ALG11Q2TAA5 492 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DEFB133Q30KQ1 61 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR33Q49SQ1 333 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ATP13A5Q4VNC0 1218 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CCDC38Q502W7 563 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CCDC157Q569K6 752 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 AARS2Q5JTZ9 985 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CERCAMQ5T4B2 595 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 LYPLAL1Q5VWZ2 237 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ARMC3Q5W041 872 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DENND5AQ6IQ26 1287 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ZCCHC8Q6NZY4 707 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 C8orf74Q6P047 294 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 AFTPHQ6ULP2 937 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 RFLNAQ6ZTI6 216 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SNX20Q7Z614 316 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CTAGE6Q86UF2 777 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRIM74Q86UV6 250 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 LRRTM4Q86VH4 590 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 HOOK3Q86VS8 718 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 JAMLQ86YT9 394 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRAPPC5Q8IUR0 188 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CTAGE4Q8IX94 777 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 KLHDC8BQ8IXV7 354 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 RBFAQ8N0V3 343 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 PDIK1LQ8N165 341 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CEP112Q8N8E3 955 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 MCUQ8NE86 351 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 OR13C4Q8NGS5 318 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DTX3LQ8TDB6 740 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 PTCD2Q8WV60 388 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 OR1E3Q8WZA6 343 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SLCO2A1Q92959 643 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 PDXPQ96GD0 296 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SNF8Q96H20 258 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF514Q96K75 400 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DNAJC1Q96KC8 554 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 VPS35Q96QK1 796 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 OR2M4Q96R27 311 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 RANBP9Q96S59 729 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 AGAP2Q99490 1192 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 COPS8Q99627 209 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 LGR4Q9BXB1 951 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRIM31Q9BZY9 425 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 DPEP2Q9H4A9 486 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 VPS37BQ9H9H4 285 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRIM39Q9HCM9 518 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 FGF22Q9HCT0 170 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ARFGAP3Q9NP61 516 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 IL26Q9NPH9 171 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 MRPL40Q9NQ50 206 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 NLE1Q9NVX2 485 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TRNAU1APQ9NX07 287 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR34Q9UPC5 381 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 APOBEC2Q9Y235 224 aaKnown RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 TCAF1Q9Y4C2 921 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 MAD1L1Q9Y6D9 718 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 CFAP54Q96N23 3096 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 PIKFYVEQ9Y2I7 2098 aa8.06□□□□□ -1.12
TM4SF1-204ENST00000493348 SDR42E2A6NKP2 422 aa8.05□□□□□ -1.12
TM4SF1-204ENST00000493348 FADS2P1A8MWK0 482 aa8.05□□□□□ -1.12
TM4SF1-204ENST00000493348 LMO7DNF2Z398 122 aa8.05□□□□□ -1.12
TM4SF1-204ENST00000493348 QSOX1O00391 747 aa8.05□□□□□ -1.12
TM4SF1-204ENST00000493348 TPP1O14773 563 aa8.05□□□□□ -1.12
TM4SF1-204ENST00000493348 TNFSF14O43557 240 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms