RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF274Q96GC6 653 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 INTS4Q96HW7 963 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NSMCE3Q96MG7 304 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TOX2Q96NM4 488 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 BBS4Q96RK4 519 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PARK7Q99497 189 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 FERMT1Q9BQL6 677 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 FDXACB1Q9BRP7 624 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF577Q9BSK1 485 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC28BQ9BUN5 200 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SLC25A23Q9BV35 468 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TRIM15Q9C019 465 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 UBE2OQ9C0C9 1292 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 OR52A5Q9H2C5 316 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 TTYH1Q9H313 450 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ASB8Q9H765 288 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 ZMAT4Q9H898 229 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 KAT14Q9H8E8 782 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SP140LQ9H930 580 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PANK3Q9H999 370 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 AGO3Q9H9G7 860 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SERHLQ9NQF3 203 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PNPOQ9NVS9 261 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NKIRAS1Q9NYS0 192 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NDUFA13Q9P0J0 144 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PDP1Q9P0J1 537 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 BTBD7Q9P203 1132 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PTGFRNQ9P2B2 879 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 LRIT1Q9P2V4 623 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 NCDNQ9UBB6 729 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 SERGEFQ9UGK8 458 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 LIMA1Q9UHB6 759 aaKnown RBP4.2□□□□□ -1.74
BRCA1-220ENST00000492859 LNPEPQ9UIQ6 1025 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 VPS4AQ9UN37 437 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PCDHA6Q9UN73 950 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 PLLPQ9Y342 182 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 LIPGQ9Y5X9 500 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 CNTLNQ9NXG0 1405 aa4.2□□□□□ -1.74
BRCA1-220ENST00000492859 FHOD3Q2V2M9 1422 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CARMIL2Q6F5E8 1435 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 A0A0U1RQS6 177 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CDC14CA4D256 554 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OR2A25A4D2G3 310 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OR52A4PA6NMU1 304 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF839A8K0R7 811 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SYCE1LA8MT33 242 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CENPBD1B2RD01 187 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 H7C1Q1 480 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 K7EQM0 130 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GFRA2O00451 464 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NR5A2O00482 541 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NOP56O00567 594 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CES2O00748 559 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 HS3ST1O14792 307 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 AIM2O14862 343 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DNPH1O43598 174 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TLX3O43711 291 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 LANCL1O43813 399 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 HBP1O60381 514 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PSIP1O75475 530 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZFPL1O95159 310 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 AHSA1O95433 338 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 FABP1P07148 127 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RPS17P08708 135 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 INHBBP09529 407 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CLEC2LP0C7M8 214 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 F3P13726 295 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ACPPP15309 386 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NCF2P19878 526 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 RAB4AP20338 218 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ACP1P24666 158 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 GRNP28799 593 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CD40LGP29965 261 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CDK7P50613 346 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CLCN7P51798 805 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 BCAT1P54687 386 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ST8SIA6P61647 398 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PTH1RQ03431 593 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF33AQ06730 810 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PCDH1Q08174 1060 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 PDZK1IP1Q13113 114 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 STX5Q13190 355 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DMP1Q13316 513 aaPredicted RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NAB1Q13506 487 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CAMK1Q14012 370 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 TAZQ16635 292 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 SYT16Q17RD7 645 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 MBNL2Q5VZF2 373 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 DCAF15Q66K64 600 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NAPEPLDQ6IQ20 393 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 NCEH1Q6PIU2 408 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC137Q6PK04 289 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 CRTC3Q6UUV7 619 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 IL20RBQ6UXL0 311 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 KIAA0408Q6ZU52 694 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 OTOP1Q7RTM1 612 aa4.19□□□□□ -1.74
BRCA1-220ENST00000492859 ADAT2Q7Z6V5 191 aaKnown RBP4.19□□□□□ -1.74
BRCA1-220ENST00000492859 YRDCQ86U90 279 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms