RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 YBX1P67809 324 aaKnown RBP12.78□□□□□ -0.36
PRAME-213ENST00000492657 AFTPHQ6ULP2 937 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 UGT2A3Q6UWM9 527 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 RAB44Q7Z6P3 723 aaPredicted RBP12.78□□□□□ -0.36
PRAME-213ENST00000492657 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 DCBLD1Q8N8Z6 715 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 OR6K2Q8NGY2 324 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 NCSTNQ92542 709 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 ATP6V1E2Q96A05 226 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 KIAA1191Q96A73 305 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 CCDC68Q9H2F9 335 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 CWH43Q9H720 699 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
PRAME-213ENST00000492657 UBAP1Q9NZ09 502 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
PRAME-213ENST00000492657 RIMS3Q9UJD0 308 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 ANAPC1Q9H1A4 1944 aa12.78□□□□□ -0.36
PRAME-213ENST00000492657 A0A1B0GVM2 712 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 ANKRD66B4E2M5 251 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 K7ERQ8 282 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 HOXA2O43364 376 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 PEX1O43933 1283 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 NRP2O60462 931 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 TBL1XO60907 577 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 RNASEH2AO75792 299 aaKnown RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 PENKP01210 267 aaPredicted RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 CTPS1P17812 591 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 LPOP22079 712 aaPredicted RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 ZXDBP98169 803 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 KIF19Q2TAC6 998 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 NADK2Q4G0N4 442 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 IL23RQ5VWK5 629 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 CYP2R1Q6VVX0 501 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 FBXO39Q8N4B4 442 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 WFDC5Q8TCV5 224 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 HSPBAP1Q96EW2 488 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 IGSF21Q96ID5 467 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 CDK5RAP1Q96SZ6 601 aaKnown RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 INTS10Q9NVR2 710 aaKnown RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 UTP6Q9NYH9 597 aaKnown RBP12.77□□□□□ -0.36
PRAME-213ENST00000492657 RIMKLBQ9ULI2 386 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 TBC1D30Q9Y2I9 924 aa12.77□□□□□ -0.36
PRAME-213ENST00000492657 GBF1Q92538 1859 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 BTN3A1O00481 513 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 NR5A2O00482 541 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 EFEMP2O95967 443 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 PABPC4LP0CB38 370 aaKnown RBP12.77□□□□□ -0.37
PRAME-213ENST00000492657 CLCQ05315 142 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 ADGRE1Q14246 886 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 GRM2Q14416 872 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 CTSL3PQ5NE16 218 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.37
PRAME-213ENST00000492657 KLHDC10Q6PID8 442 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 ZNF461Q8TAF7 563 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 RHEBL1Q8TAI7 183 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 STAG3L4Q8TBR4 150 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 EEF1AKMT1Q8WVE0 214 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 FUBP1Q96AE4 644 aaKnown RBP12.77□□□□□ -0.37
PRAME-213ENST00000492657 PLD4Q96BZ4 506 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 BTBD9Q96Q07 612 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
PRAME-213ENST00000492657 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
PRAME-213ENST00000492657 A0A0J9YVX5 310 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 STX7O15400 261 aaKnown RBP12.76□□□□□ -0.37
PRAME-213ENST00000492657 FOXD2O60548 495 aaPredicted RBP12.76□□□□□ -0.37
PRAME-213ENST00000492657 KERAO60938 352 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 CHRM3P20309 590 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 CA5AP35218 305 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 HK3P52790 923 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 RAD51Q06609 339 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 TWF1Q12792 350 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 SPOUT1Q5T280 376 aaKnown RBP12.76□□□□□ -0.37
PRAME-213ENST00000492657 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 TUBGCP3Q96CW5 907 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 EID2BQ96D98 161 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
PRAME-213ENST00000492657 TRIM8Q9BZR9 551 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 DERL2Q9GZP9 239 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 POPDC3Q9HBV1 291 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 SYTL2Q9HCH5 934 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PRSS51A0A1B0GVH4 220 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 H0Y626 953 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 TRIM24O15164 1050 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 TSPAN12O95859 305 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 TFAP2AP05549 437 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 FGF4P08620 206 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 ALPIP09923 528 aa12.76□□□□□ -0.37
PRAME-213ENST00000492657 SMIM18P0DKX4 95 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms