RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 GAGE12IP0CL82 117 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 HLA-DPA1P20036 260 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GGT5P36269 586 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 CENPAP49450 140 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 PHEXP78562 749 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 IL1RL1Q01638 556 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 PTP4A2Q12974 167 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GAGE1Q13065 139 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GAGE4Q13068 117 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 DMP1Q13316 513 aaPredicted RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 DCTN2Q13561 401 aaKnown RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 CAMK1Q14012 370 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 TRIM29Q14134 588 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 TNIP1Q15025 636 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 PPA1Q15181 289 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 TAF7Q15545 349 aaPredicted RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 ZNF674Q2M3X9 581 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 FAM69BQ5VUD6 431 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 RAB12Q6IQ22 244 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 CES5AQ6NT32 575 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ADAM5Q6NVV9 412 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 DENND5BQ6ZUT9 1274 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 SHFQ7M4L6 423 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 KIAA2013Q8IYS2 634 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 SCML4Q8N228 414 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ARRDC2Q8TBH0 407 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ZCCHC10Q8TBK6 192 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 LRRC8CQ8TDW0 803 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 SCFD2Q8WU76 684 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 DEPDC1BQ8WUY9 529 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 HSPH1Q92598 858 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 STAMQ92783 540 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 PTP4A1Q93096 173 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 OTULINQ96BN8 352 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 C3orf30Q96M34 536 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 CSF3RQ99062 836 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 FTOQ9C0B1 505 aaKnown RBP eCLIP3.32□□□□□ -1.88
VPS36-205ENST00000492650 MMP28Q9H239 520 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 SPATS2LQ9NUQ6 558 aaKnown RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 ADPRHL2Q9NX46 363 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ANKRD10Q9NXR5 420 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 C5AR2Q9P296 337 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 CNOT7Q9UIV1 285 aaKnown RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 MOSPD1Q9UJG1 213 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 IKBKGQ9Y6K9 419 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 FAM169AQ9Y6X4 670 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 CLSPNQ9HAW4 1339 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 KDM3AQ9Y4C1 1321 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 NPIPB15A6NHN6 443 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 TAF4O00268 1085 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 NDC80O14777 642 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 TSPAN4O14817 238 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 GUCY1B2O75343 617 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 RGS11O94810 467 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 GUCA1CO95843 209 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SERPINB2P05120 415 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 GCH1P30793 250 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 HNF1BP35680 557 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 TCF7P36402 384 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 PIGAP37287 484 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 HARS2P49590 506 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 CRIP2P52943 208 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 LIMK1P53667 647 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SLMAPQ14BN4 828 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 NFIL3Q16649 462 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 NAPEPLDQ6IQ20 393 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 CCDC186Q7Z3E2 898 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 PIWIL3Q7Z3Z3 882 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 GLRX5Q86SX6 157 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 ZC3HC1Q86WB0 502 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 SFR1Q86XK3 245 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SFTPA2Q8IWL1 248 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 WDTC1Q8N5D0 677 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 TDRD5Q8NAT2 981 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 EXOC4Q96A65 974 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 RNFT2Q96EX2 444 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 PGAP3Q96FM1 320 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 MASTLQ96GX5 879 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 CABS1Q96KC9 395 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 PGLYRP2Q96PD5 576 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 ANP32EQ9BTT0 268 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 FSD1Q9BTV5 496 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 ACAT2Q9BWD1 397 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 PHF7Q9BWX1 381 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 SLC25A18Q9H1K4 315 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 RANBP17Q9H2T7 1088 aaKnown RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 TTC12Q9H892 705 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 COPS7BQ9H9Q2 264 aaPredicted RBP3.31□□□□□ -1.88
VPS36-205ENST00000492650 SLC35C2Q9NQQ7 365 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 CYSLTR2Q9NS75 346 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 PPP1R14DQ9NXH3 145 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 TAB2Q9NYJ8 693 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SLC9A2Q9UBY0 812 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 SLCO3A1Q9UIG8 710 aa3.31□□□□□ -1.88
VPS36-205ENST00000492650 CORO1CQ9ULV4 474 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms