RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	OR4K2	Q8NGD2	314 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	OR2M4	Q96R27	311 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	EIF2B3	Q9NR50	452 aa	Known RBP	13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPR34	Q9UPC5	381 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	MSRB2	Q9Y3D2	182 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPSM3	Q9Y4H4	160 aa		13.69	□□□□□ -0.22
PTPN7-215	ENST00000492451	WDFY3	Q8IZQ1	3526 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	BUD23	O43709	281 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	CAPNS1	P04632	268 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	GP1BA	P07359	652 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	CELA2B	P08218	269 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	COIL	P38432	576 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ADCY8	P40145	1251 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	CDK16	Q00536	496 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	E2F1	Q01094	437 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	TCEA2	Q15560	299 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ATP13A5	Q4VNC0	1218 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	PYCR3	Q53H96	274 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	CCDC157	Q569K6	752 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	LDLRAP1	Q5SW96	308 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	CCDC137	Q6PK04	289 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	FAM151B	Q6UXP7	276 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	MARK2	Q7KZI7	788 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	PRUNE1	Q86TP1	453 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ARL10	Q8N8L6	244 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	KDF1	Q8NAX2	398 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	FAM46D	Q8NEK8	389 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	OR52K1	Q8NGK4	314 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	GRK7	Q8WTQ7	553 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNHIT2	Q9UHR6	403 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZMIZ1	Q9ULJ6	1067 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	SAR1B	Q9Y6B6	198 aa		13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	OAS3	Q9Y6K5	1087 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	GOLGA4	Q13439	2230 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNF185	O15231	689 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	LDB2	O43679	373 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	NUAK1	O60285	661 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	DNAJC6	O75061	913 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	PHF2	O75151	1096 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	TPH1	P17752	444 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	FNTA	P49354	379 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNF140	P52738	457 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	BASP1	P80723	227 aa	Known RBP	13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	CTBS	Q01459	385 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	SEPT6	Q14141	434 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	POU6F1	Q14863	301 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	CHRNA6	Q15825	494 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	TTC27	Q6P3X3	843 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	OGFOD3	Q6PK18	319 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	ADGRG6	Q86SQ4	1221 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	SLC35F3	Q8IY50	421 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	GALNT15	Q8N3T1	639 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	OR6C4	Q8NGE1	309 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	GDAP1	Q8TB36	358 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNF398	Q8TD17	642 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	STYX	Q8WUJ0	223 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	PTCD2	Q8WV60	388 aa	Known RBP	13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	NAT6	Q93015	286 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	TTC25	Q96NG3	672 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	OR2AG1	Q9H205	316 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	DPEP2	Q9H4A9	486 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	CASS4	Q9NQ75	786 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	SMOX	Q9NWM0	555 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	ATXN10	Q9UBB4	475 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	GULP1	Q9UBP9	304 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	RALY	Q9UKM9	306 aa	Known RBP	13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	PADI4	Q9UM07	663 aa		13.67	□□□□□ -0.22
PTPN7-215	ENST00000492451	CFAP47	Q6ZTR5	3102 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	LY6G6E	A0A0G2JKS1	128 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	HEATR9	A2RTY3	570 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	EME2	A4GXA9	379 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	TAF4	O00268	1085 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	KMO	O15229	486 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	GRID2	O43424	1007 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SRP72	O76094	671 aa	Known RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	CDK14	O94921	469 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	PRAMEF1	O95521	474 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	KRT14	P02533	472 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	ZNF8	P17098	575 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	PAFAH1B1	P43034	410 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SARNP	P82979	210 aa	Known RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	GTF2H3	Q13889	308 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	PTPRCAP	Q14761	206 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SKIDA1	Q1XH10	827 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	NLRP9	Q7RTR0	991 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	NRROS	Q86YC3	692 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	DDHD1	Q8NEL9	900 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	OR13C4	Q8NGS5	318 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	CCL4L1	Q8NHW4	92 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	IFI44	Q8TCB0	444 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	RANBP9	Q96S59	729 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	NLE1	Q9NVX2	485 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SMARCAL1	Q9NZC9	954 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	TAAR2	Q9P1P5	351 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SIRPG	Q9P1W8	387 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	RNF14	Q9UBS8	474 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms