RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 TMTC1Q8IUR5 882 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ANKRD52Q8NB46 1076 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 BEST2Q8NFU1 509 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 BBS4Q96RK4 519 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 CD180Q99467 661 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 KCNN2Q9H2S1 579 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 MAGEE1Q9HCI5 957 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 IQGAP1P46940 1657 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 PIK3C2BO00750 1634 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ZC3H13Q5T200 1668 aaKnown RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 NWD1Q149M9 1564 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 DHX57Q6P158 1386 aaKnown RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 A0A0G2JLW4 131 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 TMEM202A6NGA9 273 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 FAM90A7PA6NKC0 464 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 FAM90A22PA8MWA6 464 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 FAM90A12PA8MX19 464 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 FAM90A23PA8MXZ1 464 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 ZNHIT1O43257 154 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 PRKNO60260 465 aaPredicted RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 AGAP20933 346 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 RAD23BP54727 409 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 ACTR2P61160 394 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 TAF11Q15544 211 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 KRTAP13-3Q3SY46 172 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 SGO1Q5FBB7 561 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 OR7E24Q6IFN5 339 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 TTI2Q6NXR4 508 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 LINGO2Q7L985 606 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 UNC5CLQ8IV45 518 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 ZCCHC9Q8N567 271 aaKnown RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 OR52I2Q8NH67 350 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 PIGTQ969N2 578 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 LINGO1Q96FE5 620 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 NEURL2Q9BR09 285 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 NDST4Q9H3R1 872 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 GPR108Q9NPR9 543 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 SNTG1Q9NSN8 517 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 INTS10Q9NVR2 710 aaKnown RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 GEMIN8Q9NWZ8 242 aaKnown RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 FBXO9Q9UK97 447 aaPredicted RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 TTC7AQ9ULT0 858 aaPredicted RBP3.69□□□□□ -1.82
PHC3-213ENST00000491258 TECPR2O15040 1411 aa3.69□□□□□ -1.82
PHC3-213ENST00000491258 RAB3GAP2Q9H2M9 1393 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 SYNGR3O43761 229 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 FAM155BO75949 473 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 SORBS2O94875 1100 aaKnown RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 ERVK-10P10266 1014 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 ZNF26P17031 533 aaPredicted RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 POLR2CP19387 275 aaPredicted RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 MAOAP21397 527 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 AMPHP49418 695 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TMEM187Q14656 261 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TCTN1Q2MV58 587 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TMEM35AQ53FP2 167 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TCTE1Q5JU00 501 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 FBXO46Q6PJ61 603 aaPredicted RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 TRPT1Q86TN4 253 aaKnown RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 SLC35F3Q8IY50 421 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TAAR8Q969N4 342 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 ERVMER34-1Q9H9K5 563 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 BPIFA1Q9NP55 256 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 IL1RAPL1Q9NZN1 696 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 PEMTQ9UBM1 199 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TMEM131LA2VDJ0 1609 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 TRPM2O94759 1503 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 ASXL1Q8IXJ9 1541 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 PIK3C2GO75747 1445 aa3.68□□□□□ -1.82
PHC3-213ENST00000491258 YTHDC2Q9H6S0 1430 aaKnown RBP3.68□□□□□ -1.82
PHC3-213ENST00000491258 BCL9LQ86UU0 1499 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 CDK12Q9NYV4 1490 aaPredicted RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 UBR1Q8IWV7 1749 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ABHD14A-ACY1A0A1B0GW23 586 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 A0A1W2PNU3 283 aaPredicted RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 MEIOCA2RUB1 952 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 CD48P09326 243 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 DDX5P17844 614 aaKnown RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 HOXC8P31273 242 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 KRT9P35527 623 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 METAP2P50579 478 aaKnown RBP eCLIP3.67□□□□□ -1.82
PHC3-213ENST00000491258 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 RPL24P83731 157 aaKnown RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 ITGA9Q13797 1035 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 RBMS3Q6XE24 437 aaKnown RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 ZNF440Q8IYI8 595 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 SPATA6LQ8N4H0 392 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ZBTB2Q8N680 514 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 SPPL3Q8TCT6 385 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ZNF473Q8WTR7 871 aaKnown RBP3.67□□□□□ -1.82
PHC3-213ENST00000491258 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 SH3GL2Q99962 352 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 PPP1R3EQ9H7J1 279 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 MMP25Q9NPA2 562 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ZDHHC18Q9NUE0 388 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 KIAA1456Q9P272 454 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 KIF17Q9P2E2 1029 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 ACSL5Q9ULC5 683 aa3.67□□□□□ -1.82
PHC3-213ENST00000491258 MRPS28Q9Y2Q9 187 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms