RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SPATA16Q9BXB7 569 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 GPR63Q9BZJ6 419 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 CARD9Q9H257 536 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 TRIM39Q9HCM9 518 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 NFKBIL1Q9UBC1 381 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-219ENST00000491183 KCNK6Q9Y257 313 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 ADGRG1Q9Y653 693 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 DUSP10Q9Y6W6 482 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 NVLO15381 856 aaKnown RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 GRID2O43424 1007 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 NDUFA10O95299 355 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 SLC4A1P02730 911 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 ACP5P13686 325 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 FASLGP48023 281 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 WNT3AP56704 352 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 VAC14Q08AM6 782 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 TGIF1Q15583 401 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 CLPPQ16740 277 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 IYDQ6PHW0 289 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 PID1Q7Z2X4 250 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 DAAM2Q86T65 1068 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 ZNF761Q86XN6 746 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 ZNF567Q8N184 647 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 TRAM1L1Q8N609 369 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 SNRNP27Q8WVK2 155 aaKnown RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 USP7Q93009 1102 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 HERPUD2Q9BSE4 406 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 HEMGNQ9BXL5 484 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 FAM153AQ9UHL3 310 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 ACSL6Q9UKU0 697 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 TMPRSS11EQ9UL52 423 aa17.81■□□□□ 0.44
HMGN1-219ENST00000491183 REXO2Q9Y3B8 237 aaKnown RBP17.81■□□□□ 0.44
HMGN1-219ENST00000491183 A6NCN8 305 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 F5H423 210 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 ZW10O43264 779 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 EFSO43281 561 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 MTSS1O43312 755 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 SLC25A14O95258 325 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 PRB1P04280 392 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 CCL4P13236 92 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 CSF2RBP32927 897 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 CHRNA4P43681 627 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 LIMK2P53671 638 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 ZNF569Q5MCW4 686 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 RAD9BQ6WBX8 426 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 BBS12Q6ZW61 710 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 ADGRG6Q86SQ4 1221 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 RCBTB1Q8NDN9 531 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 HTR3CQ8WXA8 447 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 SLC39A7Q92504 469 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 GLYATL1Q969I3 302 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 OXNAD1Q96HP4 312 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 MRGPRX2Q96LB1 330 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 CCDC74BQ96LY2 380 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 FCRL5Q96RD9 977 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 ZSCAN5AQ9BUG6 496 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 C10orf88Q9H8K7 445 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 BPIFA1Q9NP55 256 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 RAD18Q9NS91 495 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 KCNK4Q9NYG8 393 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 TMEM9Q9P0T7 183 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 KLHL8Q9P2G9 620 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGN1-219ENST00000491183 PCDHA3Q9Y5H8 950 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 MGAQ8IWI9 3026 aa17.8■□□□□ 0.44
HMGN1-219ENST00000491183 ATRXP46100 2492 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 PRAMEF33A0A0G2JMD5 474 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 HACD1B0YJ81 288 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 C9orf172C9J069 976 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 K7ENP7 123 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 CHUKO15111 745 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 PRAMEF10O60809 474 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 EPOP01588 193 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 MPSTP25325 297 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 MAPK10P53779 464 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 PPP2R5EQ16537 467 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 KHDC1Q4VXA5 237 aaKnown RBP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 SIRPB2Q5JXA9 342 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 PDPK2PQ6A1A2 396 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 INO80CQ6PI98 192 aaPredicted RBP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 GAS2L3Q86XJ1 694 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 TTC30BQ8N4P2 665 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 OR4D9Q8NGE8 314 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 QKIQ96PU8 341 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 SRPK1Q96SB4 655 aaKnown RBP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 VAT1Q99536 393 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 SLC38A3Q99624 504 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 LUC7LQ9NQ29 371 aaKnown RBP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
HMGN1-219ENST00000491183 FOXJ2Q9P0K8 574 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 SLC23A2Q9UGH3 650 aa17.79■□□□□ 0.44
HMGN1-219ENST00000491183 TK2O00142 265 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 SNX2O60749 519 aa17.78■□□□□ 0.44
HMGN1-219ENST00000491183 FGF3P11487 239 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms