RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 RPS6KA1Q15418 735 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 TAZQ16635 292 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SMTNL2Q2TAL5 461 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 ZFYVE27Q5T4F4 411 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 ATP1A1-AS1Q5TC04 95 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 DENND2CQ68D51 928 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 ANKS6Q68DC2 871 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 TXNRD3NBQ6F5E7 133 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 BORAQ6PGQ7 559 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CLEC18BQ6UXF7 455 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 TECPR1Q7Z6L1 1165 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CLEC18CQ8NCF0 446 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 OR4D9Q8NGE8 314 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SLC37A2Q8TED4 501 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 PDCD6IPQ8WUM4 868 aaKnown RBP8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CSPG4P5Q96PW8 444 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 OR2M4Q96R27 311 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 AGAP2Q99490 1192 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 DDA1Q9BW61 102 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 MAK16Q9BXY0 300 aaKnown RBP8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SPRY4Q9C004 299 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CARD9Q9H257 536 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 NOD2Q9HC29 1040 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 PHPT1Q9NRX4 125 aaPredicted RBP8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 TRMT1Q9NXH9 659 aaKnown RBP8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 TRIM10Q9UDY6 481 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SEPT3Q9UH03 358 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CD84Q9UIB8 345 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 HIVEP3Q5T1R4 2406 aa8.39□□□□□ -1.07
PCOLCE-209ENST00000490909 A0A0U1RQJ8 604 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 A6NCN8 305 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 EFCAB7A8K855 629 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PSMD11O00231 422 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CES2O00748 559 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 FZD6O60353 706 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 RAD1O60671 282 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PGLSO95336 258 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 KRT1P04264 644 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PDHA1P08559 390 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CTPS1P17812 591 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TEAD1P28347 426 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 FASLGP48023 281 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 NR2C2P49116 596 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CDC20Q12834 499 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TRA2AQ13595 282 aaKnown RBP eCLIP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 DPYSL3Q14195 570 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 ZNF235Q14590 738 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CLPPQ16740 277 aaPredicted RBP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TFDP3Q5H9I0 405 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 LRRC66Q68CR7 880 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TIPARPQ7Z3E1 657 aaKnown RBP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 UNC5BQ8IZJ1 945 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CACNA2D3Q8IZS8 1091 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 SFRP1Q8N474 314 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PIH1D2Q8WWB5 315 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 MAIP1Q8WWC4 291 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 SCAMP4Q969E2 229 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 RTP4Q96DX8 246 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 RNF31Q96EP0 1072 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PBKQ96KB5 322 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 RNF157Q96PX1 679 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TAAR9Q96RI9 348 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 NUDCD1Q96RS6 583 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 BRD8Q9H0E9 1235 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 CDH19Q9H159 772 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 ADNPQ9H2P0 1102 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 APMAPQ9HDC9 416 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 SIDT1Q9NXL6 827 aaKnown RBP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PDP2Q9P2J9 529 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 ANKMY1Q9P2S6 941 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PILRAQ9UKJ1 303 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 OAS3Q9Y6K5 1087 aaKnown RBP8.38□□□□□ -1.07
PCOLCE-209ENST00000490909 DOPEY1Q5JWR5 2465 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 LOC101059948A0A1B0GTJ6 334 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GOLGA6CA6NDK9 693 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GOLGA6BA6NDN3 693 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 C3orf70A6NLC5 250 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 B4E171 279 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 PDE2AO00408 941 aaPredicted RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 APOL1O14791 398 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 NKX2-8O15522 239 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 DDX3YO15523 660 aaKnown RBP8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 MFSD11O43934 449 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 TJP3O95049 919 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 DLGAP3O95886 979 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 FTCDO95954 541 aa8.37□□□□□ -1.07
PCOLCE-209ENST00000490909 GOLGA6DP0CG33 693 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms