RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CCDC66A2RUB6 948 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CAPN5O15484 640 aaPredicted RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 DDX3YO15523 660 aaKnown RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 KRT86O43790 486 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 ECEL1O95672 775 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CCDC175P0C221 793 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CSTF2P33240 577 aaKnown RBP eCLIP10.29□□□□□ -0.763e-6■■■□□ 18.2
TTC28-207ENST00000490475 ACTR1BP42025 376 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 FASLGP48023 281 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 NR2C2P49116 596 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 LIMK2P53671 638 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 MAPK10P53779 464 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 ACTR1AP61163 376 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CTBSQ01459 385 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 PPIDQ08752 370 aaKnown RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 NIPAL4Q0D2K0 466 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 AMZ1Q400G9 498 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 LRRC66Q68CR7 880 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 SLC30A9Q6PML9 568 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 BBS12Q6ZW61 710 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 NRROSQ86YC3 692 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 SYCE1Q8N0S2 351 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CNTD1Q8N815 330 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 OR10G6Q8NH81 332 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CCL4L1Q8NHW4 92 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 P3H4Q92791 437 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 USP7Q93009 1102 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 HDAC11Q96DB2 347 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 AHCYL2Q96HN2 611 aaKnown RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 EFHD1Q9BUP0 239 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 DDA1Q9BW61 102 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 CEP41Q9BYV8 373 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 TSGA10Q9BZW7 698 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 C10orf88Q9H8K7 445 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 SPATS2LQ9NUQ6 558 aaKnown RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 KCNK4Q9NYG8 393 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 PKD2L2Q9NZM6 624 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 PPP2R2CQ9Y2T4 447 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 TTLL3Q9Y4R7 772 aa10.29□□□□□ -0.76
TTC28-207ENST00000490475 HEMK1Q9Y5R4 338 aaPredicted RBP10.29□□□□□ -0.76
TTC28-207ENST00000490475 PRAMEF33A0A0G2JMD5 474 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 EFSO43281 561 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 B4GAT1O43505 415 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 DUX1O43812 170 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PRAMEF10O60809 474 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 HLA-DQB2P05538 268 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 HGFP14210 728 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 STC1P52823 247 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 MAZP56270 477 aaKnown RBP10.28□□□□□ -0.76
TTC28-207ENST00000490475 COPS2P61201 443 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 DSC2Q02487 901 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PTSQ03393 145 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ZBTB17Q13105 803 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PTPRRQ15256 657 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PPP2R5EQ16537 467 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PYCR3Q53H96 274 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 KCTD16Q68DU8 428 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 TMEM71Q6P5X7 295 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ZC3H18Q86VM9 953 aaKnown RBP10.28□□□□□ -0.76
TTC28-207ENST00000490475 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 NAGSQ8N159 534 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 UBL4BQ8N7F7 174 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ARRDC2Q8TBH0 407 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 HES6Q96HZ4 224 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 SLC38A3Q99624 504 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 FAM118BQ9BPY3 351 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ZPBPQ9BS86 351 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 TDRD1Q9BXT4 1180 aaKnown RBP10.28□□□□□ -0.76
TTC28-207ENST00000490475 OSBPL8Q9BZF1 889 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 BRD8Q9H0E9 1235 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 ABCG8Q9H221 673 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 KCNF1Q9H3M0 494 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 PCDH9Q9HC56 1237 aa10.28□□□□□ -0.76
TTC28-207ENST00000490475 IGHV1OR21-1A0A087WYE8 117 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 KIR2DS5A0A0G2JLQ3 304 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 A0A0G2JNG1 304 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 IGHV5-10-1A0A0J9YXX1 117 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PMS2P1A4D2B8 440 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 MIF4GDA9UHW6 222 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 B4E171 279 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 KIR2DS3K7RE56 304 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PPP1R12AO14974 1030 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 NRDCO43847 1150 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 ASMTLO95671 621 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PDHA1P08559 390 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 CTPS1P17812 591 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 ITIH1P19827 911 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 AK4P27144 223 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 CD1CP29017 333 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 TSPAN7P41732 249 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 EPHA4P54764 986 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 OR1D5P58170 312 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms