RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IL1R1P14778 569 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TCF4P15884 667 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 STMN1P16949 149 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ALOX12P18054 663 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP2C18P33260 490 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EPHX2P34913 555 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GP5P40197 560 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HAAOP46952 286 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NOVP48745 357 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 POLD2P49005 469 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ACOT2P49753 483 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RGS7P49802 495 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 POLR2GP62487 172 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FADDQ13158 208 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SEMA3BQ13214 749 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TNK1Q13470 666 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GPR50Q13585 617 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DDR2Q16832 855 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 AOC3Q16853 763 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DPY19L1Q2PZI1 675 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ASPRV1Q53RT3 343 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PRR16Q569H4 304 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TOR2AQ5JU69 321 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GLRA4Q5JXX5 417 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 COLEC12Q5KU26 742 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ODR4Q5SWX8 454 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GRTP1Q5TC63 336 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LCN8Q6JVE9 175 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LLGL2Q6P1M3 1020 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 C8orf82Q6P1X6 216 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DARS2Q6PI48 645 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ARSKQ6UWY0 536 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NAPRTQ6XQN6 538 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DPY19L3Q6ZPD9 716 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PIGZQ86VD9 579 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 P2RY8Q86VZ1 359 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 AMIGO1Q86WK6 493 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PLD3Q8IV08 490 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DNAJC10Q8IXB1 793 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ABRAQ8N0Z2 381 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NIPA2Q8N8Q9 360 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ANKRD52Q8NB46 1076 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FBXL13Q8NEE6 735 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM83FQ8NEG4 500 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 APPL2Q8NEU8 664 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 OR7D4Q8NG98 312 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SETD6Q8TBK2 473 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEE2Q8TD90 523 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BCL7CQ8WUZ0 217 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RORBQ92753 470 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ROPN1LQ96C74 230 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BIRC7Q96CA5 298 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 LGALS12Q96DT0 336 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DYNLL2Q96FJ2 89 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SIGLEC10Q96LC7 697 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HSFY1Q96LI6 401 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MAGEB10Q96LZ2 347 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 HEXIM2Q96MH2 286 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RDH12Q96NR8 316 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NSUN5Q96P11 429 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 ACCSQ96QU6 501 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 FERD3LQ96RJ6 166 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 OSMRQ99650 979 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 APOL4Q9BPW4 351 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 EIF2AK1Q9BQI3 630 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 C11orf70Q9BRQ4 267 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TSEN34Q9BSV6 310 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DGCR6LQ9BY27 220 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DNAI2Q9GZS0 605 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 RSPH9Q9H1X1 276 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TNKS2Q9H2K2 1166 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MUC13Q9H3R2 512 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PCIF1Q9H4Z3 704 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NIPAL2Q9H841 368 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NTN4Q9HB63 628 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM8AQ9HCN3 771 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NGRNQ9NPE2 291 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PRDM8Q9NQV8 689 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP26B1Q9NR63 512 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 TAS2R9Q9NYW1 312 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SAE1Q9UBE0 346 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 OPTCQ9UBM4 332 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MID2Q9UJV3 735 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 AURKCQ9UQB9 309 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 BTBD3Q9Y2F9 522 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 AUP1Q9Y679 476 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 GJA3Q9Y6H8 435 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 PTPRFP10586 1907 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MAST2Q6P0Q8 1798 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SCN4AP35499 1836 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 MYH9P35579 1960 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 KAT6AQ92794 2004 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC78A2IDD5 438 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 DCDC2BA2VCK2 349 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 APOC4-APOC2K7ER74 178 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 NCAM2O15394 837 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 SULT1B1O43704 296 aa4.74□□□□□ -1.65
SNRNP40-206ENST00000489853 UGT2B17O75795 530 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms