RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 FBXO39Q8N4B4 442 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 RNF10Q8N5U6 811 aaKnown RBP17.66■□□□□ 0.42
ABCF3-217ENST00000489719 TTC13Q8NBP0 860 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 ZNF248Q8NDW4 579 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 BLOC1S5Q8TDH9 187 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 GLYATL1Q969I3 302 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 HERPUD2Q9BSE4 406 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 FOXP3Q9BZS1 431 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 OR2AG1Q9H205 316 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 ARFGAP3Q9NP61 516 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.66■□□□□ 0.42
ABCF3-217ENST00000489719 ATXN10Q9UBB4 475 aa17.66■□□□□ 0.42
ABCF3-217ENST00000489719 NFKBIL1Q9UBC1 381 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-217ENST00000489719 AAR2Q9Y312 384 aaKnown RBP17.66■□□□□ 0.42
ABCF3-217ENST00000489719 ZZEF1O43149 2961 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 TNFSF15O95150 251 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 FTCDO95954 541 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 ZNF8P17098 575 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 CHRNA4P43681 627 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PCBP4P57723 403 aaKnown RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 IGF2-ASQ6U949 168 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 USP53Q70EK8 1073 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 RAB11FIP2Q7L804 512 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 B3GNT8Q7Z7M8 397 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PHYKPLQ8IUZ5 450 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PATE1Q8WXA2 126 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 LRRC45Q96CN5 670 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 LIN37Q96GY3 246 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PLEKHG4BQ96PX9 1271 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 FAM118BQ9BPY3 351 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 TSGA10Q9BZW7 698 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 GBA3Q9H227 469 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 RALYQ9UKM9 306 aaKnown RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PACSIN2Q9UNF0 486 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 KCNK6Q9Y257 313 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 PKP3Q9Y446 797 aa17.65■□□□□ 0.42
ABCF3-217ENST00000489719 URB1O60287 2271 aaKnown RBP17.65■□□□□ 0.42
ABCF3-217ENST00000489719 GPR89AB7ZAQ6 455 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 SNX2O60749 519 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 CPNE6O95741 557 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 AGTP01019 485 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 GPR89BP0CG08 455 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ACP5P13686 325 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 SLC2A4P14672 509 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ITPKBP27987 946 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 CCKBRP32239 447 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 MLLT3P42568 568 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-217ENST00000489719 PPM1FP49593 454 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-217ENST00000489719 MAP9Q49MG5 647 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ZNF648Q5T619 568 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-217ENST00000489719 GLT6D1Q7Z4J2 308 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ZNF438Q7Z4V0 828 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ADGRG6Q86SQ4 1221 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 NAF1Q96HR8 494 aaKnown RBP17.64■□□□□ 0.41
ABCF3-217ENST00000489719 PPP1R2P1Q96PQ5 205 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 FICDQ9BVA6 458 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 AKAP7Q9P0M2 348 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-217ENST00000489719 ASXL3Q9C0F0 2248 aa17.64■□□□□ 0.41
ABCF3-217ENST00000489719 A0A0U1RQJ8 604 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 A0A1W2PNU3 283 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PLD2O14939 933 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 KMOO15229 486 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PPM1DO15297 605 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 STX7O15400 261 aaKnown RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 KRT86O43790 486 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 VEGFDO43915 354 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PPFIA2O75334 1257 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 CDK14O94921 469 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PDX1P52945 283 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 ZFP36L1Q07352 338 aaKnown RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 CLPPQ16740 277 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PHF19Q5T6S3 580 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 TTC30BQ8N4P2 665 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 CCDC110Q8TBZ0 833 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 BRSK1Q8TDC3 778 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 UBE2Q2Q8WVN8 375 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 TMEM159Q96B96 161 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 CCDC97Q96F63 343 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 TTC25Q96NG3 672 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 SLC38A3Q99624 504 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 CMKLR1Q99788 373 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 STN1Q9H668 368 aaKnown RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 IL26Q9NPH9 171 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 ASCL3Q9NQ33 180 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 KCNK4Q9NYG8 393 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 IL17CQ9P0M4 197 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 TBC1D29Q9UFV1 150 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 GUCA1BQ9UMX6 200 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 PCYT1BQ9Y5K3 369 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 ADGRG1Q9Y653 693 aa17.63■□□□□ 0.41
ABCF3-217ENST00000489719 ANKRD11Q6UB99 2663 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-217ENST00000489719 OR5K4A6NMS3 321 aa17.62■□□□□ 0.41
ABCF3-217ENST00000489719 C2orf81A6NN90 581 aa17.62■□□□□ 0.41
ABCF3-217ENST00000489719 DDX3YO15523 660 aaKnown RBP17.62■□□□□ 0.41
ABCF3-217ENST00000489719 JMJD7P0C870 316 aa17.62■□□□□ 0.41
ABCF3-217ENST00000489719 CD1CP29017 333 aa17.62■□□□□ 0.41
ABCF3-217ENST00000489719 UGT1A5P35504 534 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms