RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 TMEM184BQ9Y519 407 aaPredicted RBP10.28□□□□□ -0.76
CHKB-211ENST00000489453 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
CHKB-211ENST00000489453 TNRC6AQ8NDV7 1962 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 LILRA5A6NI73 299 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 GOLGA6L22H0YM25 854 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MKRN2OSH3BPM6 223 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MATN3O15232 486 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 GRID2O43424 1007 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 KATNA1O75449 491 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 RASSF9O75901 435 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 VIPP01282 170 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 SKILP12757 684 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 TYRP1P17643 537 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 PRKCIP41743 596 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 SPINT3P49223 89 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 GALNT2Q10471 571 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 KLRB1Q12918 225 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MAP7Q14244 749 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 IFI16Q16666 785 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 INSCQ1MX18 579 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 PLA2G4EQ3MJ16 856 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 ZFYVE27Q5T4F4 411 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 ATP1A1-AS1Q5TC04 95 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 C6orf15Q6UXA7 325 aaPredicted RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 APTXQ7Z2E3 356 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 NIPA2Q8N8Q9 360 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 TEX19Q8NA77 164 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MAML1Q92585 1016 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 BTBD6Q96KE9 485 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 ZNF830Q96NB3 372 aaPredicted RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 TGM7Q96PF1 710 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MLPHQ9BV36 600 aaPredicted RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 NUP85Q9BW27 656 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 SPATA16Q9BXB7 569 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 CARD9Q9H257 536 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 AMACRQ9UHK6 382 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 TP53TG5Q9Y2B4 290 aa10.27□□□□□ -0.77
CHKB-211ENST00000489453 MRPS18BQ9Y676 258 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 OAS3Q9Y6K5 1087 aaKnown RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 MN1Q10571 1320 aaPredicted RBP10.27□□□□□ -0.77
CHKB-211ENST00000489453 RGSL1A5PLK6 1076 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 SMTNL1A8MU46 457 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 PDZK1P1A8MUH7 402 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 FADS2P1A8MWK0 482 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 MYO1FO00160 1098 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 UBXN7O94888 489 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 DLGAP3O95886 979 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 SLC4A1P02730 911 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 ANKRD34CP0C6C1 535 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CCNYL3P0C7X3 344 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 MX2P20592 715 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 SEPHS1P49903 392 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 GFERP55789 205 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 SLC25A11Q02978 314 aaKnown RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 SEPT7Q16181 437 aaKnown RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 CRTC2Q53ET0 693 aaPredicted RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 CCDC183Q5T5S1 534 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 HENMT1Q5T8I9 393 aaKnown RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 TXNRD3NBQ6F5E7 133 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 ALG1LQ6GMV1 187 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CRTC3Q6UUV7 619 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 FAM26EQ8N5C1 309 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 KCTD6Q8NC69 237 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 GALNT6Q8NCL4 622 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CCNYQ8ND76 341 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 RNF31Q96EP0 1072 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 ELMO2Q96JJ3 720 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 OR6C1Q96RD1 312 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 ADGRE3Q9BY15 652 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 ISCUQ9H1K1 167 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 OR2AG1Q9H205 316 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 PRDM8Q9NQV8 689 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 KLC4Q9NSK0 619 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 LNPEPQ9UIQ6 1025 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 KCND3Q9UK17 655 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CROTQ9UKG9 612 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 CNOT6Q9ULM6 557 aaKnown RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 POLHQ9Y253 713 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 PLAAQ9Y263 795 aa10.26□□□□□ -0.77
CHKB-211ENST00000489453 PCYT1BQ9Y5K3 369 aaPredicted RBP10.26□□□□□ -0.77
CHKB-211ENST00000489453 SPTBN1Q01082 2364 aaKnown RBP10.25□□□□□ -0.77
CHKB-211ENST00000489453 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
CHKB-211ENST00000489453 CDC14CA4D256 554 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 A6NCN8 305 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 GPR89AB7ZAQ6 455 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 NUAK1O60285 661 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 RFPL1O75677 317 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 SLC25A14O95258 325 aaPredicted RBP10.25□□□□□ -0.77
CHKB-211ENST00000489453 NDUFA10O95299 355 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 HLA-DQB2P05538 268 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 CD48P09326 243 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 GPR89BP0CG08 455 aa10.25□□□□□ -0.77
CHKB-211ENST00000489453 ZNF8P17098 575 aaPredicted RBP10.25□□□□□ -0.77
CHKB-211ENST00000489453 CCNCP24863 283 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms