RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ANKRD6Q9Y2G4 727 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 COMMD10Q9Y6G5 202 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 PRUNE2Q8WUY3 3088 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 ATG2BQ96BY7 2078 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 UNC80Q8N2C7 3258 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 BPTFQ12830 3046 aa20.72■□□□□ 0.91
SND1-214ENST00000489417 FAM170BA6NMN3 283 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 PRMT5O14744 637 aaPredicted RBP20.71■□□□□ 0.91
SND1-214ENST00000489417 PLRG1O43660 514 aaKnown RBP20.71■□□□□ 0.91
SND1-214ENST00000489417 GLRA3O75311 464 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 PCDH8O95206 1070 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 ESR1P03372 595 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 ACADMP11310 421 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 FDXRP22570 491 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 RPS3P23396 243 aaKnown RBP eCLIP20.71■□□□□ 0.916e-10■■■□□ 14.7
SND1-214ENST00000489417 CRHR1P34998 444 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 CCT5P48643 541 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 ADARP55265 1226 aaKnown RBP20.71■□□□□ 0.91
SND1-214ENST00000489417 CDKN2DP55273 166 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 CBX1P83916 185 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 CDHR3Q6ZTQ4 885 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 KBTBD6Q86V97 674 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 MGARPQ8TDB4 240 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 DENND1AQ8TEH3 1009 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 CLPBQ9H078 707 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 POLMQ9NP87 494 aaPredicted RBP20.71■□□□□ 0.91
SND1-214ENST00000489417 INTS9Q9NV88 658 aaKnown RBP20.71■□□□□ 0.91
SND1-214ENST00000489417 ADAM21Q9UKJ8 722 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 TMPRSS11EQ9UL52 423 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 FZD4Q9ULV1 537 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 NCKAP1Q9Y2A7 1128 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 PCDHB1Q9Y5F3 818 aa20.71■□□□□ 0.91
SND1-214ENST00000489417 TM9SF1O15321 606 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 ATG13O75143 517 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 RHOBTB1O94844 696 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 SLC35E2BP0CK96 405 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 GABRG2P18507 467 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 DGKEP52429 567 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 PGGT1BP53609 377 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 FZD5Q13467 585 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 CTSL3PQ5NE16 218 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 SYT13Q7L8C5 426 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 FLCNQ8NFG4 579 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 OR14C36Q8NHC7 312 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 BIRC8Q96P09 236 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 COPS8Q99627 209 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 BOCQ9BWV1 1114 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 DCDC2Q9UHG0 476 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 A0A087X1B8 175 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 FADS2P1A8MWK0 482 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 GSTA1P08263 222 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 GMPRP36959 345 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 MDH1P40925 334 aaKnown RBP20.7■□□□□ 0.9
SND1-214ENST00000489417 ADPRHP54922 357 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 IRF9Q00978 393 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 ZNF460Q14592 562 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 SEPT7Q16181 437 aaKnown RBP20.7■□□□□ 0.9
SND1-214ENST00000489417 INSCQ1MX18 579 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 SETMARQ53H47 684 aaPredicted RBP20.7■□□□□ 0.9
SND1-214ENST00000489417 GPRC6AQ5T6X5 926 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 CLEC14AQ86T13 490 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 CCDC97Q96F63 343 aaPredicted RBP20.7■□□□□ 0.9
SND1-214ENST00000489417 ASB2Q96Q27 587 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 VPS35Q96QK1 796 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 TBC1D17Q9HA65 648 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 POPDC3Q9HBV1 291 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 MLXIPLQ9NP71 852 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 KCTD5Q9NXV2 234 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.7■□□□□ 0.9
SND1-214ENST00000489417 SLC17A7Q9P2U7 560 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 ACOT9Q9Y305 439 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 PLLPQ9Y342 182 aa20.7■□□□□ 0.9
SND1-214ENST00000489417 IGLV3-16A0A075B6K0 115 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 IGLON5A6NGN9 336 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 TM7SF2O76062 418 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 TOP3BO95985 862 aaKnown RBP20.69■□□□□ 0.9
SND1-214ENST00000489417 COL6A2P12110 1019 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 TIAL1Q01085 375 aaKnown RBP eCLIP20.69■□□□□ 0.9
SND1-214ENST00000489417 GUCY1A3Q02108 690 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 DPTQ07507 201 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 TRIM67Q6ZTA4 783 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 CCDC91Q7Z6B0 441 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 PIM3Q86V86 326 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 NLRP8Q86W28 1048 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 HMGB4Q8WW32 186 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 C12orf65Q9H3J6 166 aaKnown RBP20.69■□□□□ 0.9
SND1-214ENST00000489417 GPAMQ9HCL2 828 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 PREBQ9HCU5 417 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 TAS2R13Q9NYV9 303 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 MUTYHQ9UIF7 546 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 GNPTGQ9UJJ9 305 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 GRID1Q9ULK0 1009 aa20.69■□□□□ 0.9
SND1-214ENST00000489417 VPS26AO75436 327 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 CD9P21926 228 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 NSG1P42857 185 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 WDR4P57081 412 aaKnown RBP20.68■□□□□ 0.9
SND1-214ENST00000489417 GAS6Q14393 721 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 LRRC14Q15048 493 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 HHATQ5VTY9 493 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 SEL1L3Q68CR1 1132 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms