RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC9B2Q86UD5 537 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 MAP7D3Q8IWC1 876 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 CCHCR1Q8TD31 782 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 CPLX3Q8WVH0 158 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 NCSTNQ92542 709 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 SH3KBP1Q96B97 665 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 RTP4Q96DX8 246 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 FAM83DQ9H4H8 585 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 DTLQ9NZJ0 730 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 RGSL1A5PLK6 1076 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 ZNF891A8MT65 544 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 ANKRD66B4E2M5 251 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 GYPCP04921 128 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 MAN1A1P33908 653 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 MAPK9P45984 424 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 POLE2P56282 527 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 UBASH3AP57075 661 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 MC2RQ01718 297 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 SLC10A2Q12908 348 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 CEACAM20Q6UY09 585 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 LUZP1Q86V48 1076 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 PHYKPLQ8IUZ5 450 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 NLGN4XQ8N0W4 816 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 CCNYQ8ND76 341 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 NLGN4YQ8NFZ3 816 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 ZNF830Q96NB3 372 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 CTRCQ99895 268 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 MLPHQ9BV36 600 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 CARD9Q9H257 536 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 CBX8Q9HC52 389 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 UVRAGQ9P2Y5 699 aa18.22■□□□□ 0.51
HDAC6-231ENST00000488905 LUC7L2Q9Y383 392 aaKnown RBP18.22■□□□□ 0.51
HDAC6-231ENST00000488905 KIR2DS5A0A0G2JLQ3 304 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 A0A0G2JNG1 304 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 LILRA5A6NI73 299 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 KIR2DS3K7RE56 304 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 KCNK1O00180 336 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 ARHGAP6O43182 974 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 GRID2O43424 1007 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 NUAK1O60285 661 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 SNX2O60749 519 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 JCHAINP01591 159 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 PPIDQ08752 370 aaKnown RBP18.21■□□□□ 0.51
HDAC6-231ENST00000488905 ZBTB17Q13105 803 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 KCNAB2Q13303 367 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 GALNT3Q14435 633 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 KIR2DS5Q14953 304 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 ZNF569Q5MCW4 686 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 AVL9Q8NBF6 648 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 KIAA1143Q96AT1 154 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-231ENST00000488905 SLC45A3Q96JT2 553 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 ZPBPQ9BS86 351 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 ADGRE3Q9BY15 652 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-231ENST00000488905 EPB41L1Q9H4G0 881 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 LCMT1Q9UIC8 334 aa18.21■□□□□ 0.51
HDAC6-231ENST00000488905 MN1Q10571 1320 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-231ENST00000488905 OR5K4A6NMS3 321 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 CAPN5O15484 640 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-231ENST00000488905 IFI35P80217 286 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-231ENST00000488905 ZFYVE27Q5T4F4 411 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 CTNNBL1Q8WYA6 563 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-231ENST00000488905 CATSPER2Q96P56 530 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 TBC1D10AQ9BXI6 508 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 PACSIN1Q9BY11 444 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 SPRY4Q9C004 299 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 GPN2Q9H9Y4 310 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-231ENST00000488905 APMAPQ9HDC9 416 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 ARFGAP3Q9NP61 516 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 FBXO8Q9NRD0 319 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 ATXN10Q9UBB4 475 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 CPNE7Q9UBL6 633 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 KLHL3Q9UH77 587 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 TUBD1Q9UJT1 453 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 ADGRG1Q9Y653 693 aa18.2■□□□□ 0.5
HDAC6-231ENST00000488905 STK17BO94768 372 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 MTA2O94776 668 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 H2AFZP0C0S5 128 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 ZNF8P17098 575 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-231ENST00000488905 KDELR1P24390 212 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 MAP4P27816 1152 aaKnown RBP18.19■□□□□ 0.5
HDAC6-231ENST00000488905 CCR10P46092 362 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 CLCNKAP51800 687 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 DCDC1P59894 354 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 UBE2IP63279 158 aaKnown RBP18.19■□□□□ 0.5
HDAC6-231ENST00000488905 ALS2CLQ60I27 953 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 H2AFVQ71UI9 128 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 PLD5Q8N7P1 536 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 CNTD1Q8N815 330 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 RAPGEF5Q92565 580 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 EID2BQ96D98 161 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 RNF157Q96PX1 679 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 TRIB3Q96RU7 358 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 ZSCAN5AQ9BUG6 496 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 SPATA16Q9BXB7 569 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 OR2AG1Q9H205 316 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 OSGEPL1Q9H4B0 414 aa18.19■□□□□ 0.5
HDAC6-231ENST00000488905 ZFYVE1Q9HBF4 777 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms