RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MRRFQ96E11 262 aaKnown RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ORAI3Q9BRQ5 295 aa12.22□□□□□ -0.45
TRAIP-209ENST00000488860 FBXO6Q9NRD1 293 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
TRAIP-209ENST00000488860 UBA6A0AVT1 1052 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 CACNB4O00305 520 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 NDUFS3O75489 264 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 ASMTLO95671 621 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 MYCLP1P12525 358 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 OGNP20774 298 aaKnown RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 HSD17B3P37058 310 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 PI4KAP42356 2102 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 THOP1P52888 689 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 CTBP1Q13363 440 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 FRG1Q14331 258 aaKnown RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 UAP1Q16222 522 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 GPR33Q49SQ1 333 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 SPDYCQ5MJ68 293 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 LDLRAP1Q5SW96 308 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 GPRC6AQ5T6X5 926 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 Q6ZSR6 202 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 DET1Q7L5Y6 550 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 PPM1NQ8N819 430 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 BTN2A2Q8WVV5 523 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 PIGKQ92643 395 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 FUBP1Q96AE4 644 aaKnown RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 BMFQ96LC9 184 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 TTC1Q99614 292 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 PRRX2Q99811 253 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 APOOQ9BUR5 198 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 LGR4Q9BXB1 951 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 TM9SF3Q9HD45 589 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 SMYD2Q9NRG4 433 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 SMOXQ9NWM0 555 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 MOSPD1Q9UJG1 213 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 TMPRSS11EQ9UL52 423 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 RAB23Q9ULC3 237 aa12.21□□□□□ -0.45
TRAIP-209ENST00000488860 OAS3Q9Y6K5 1087 aaKnown RBP12.21□□□□□ -0.45
TRAIP-209ENST00000488860 SDK1Q7Z5N4 2213 aa12.21□□□□□ -0.46
TRAIP-209ENST00000488860 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 FAM159BA6NKW6 160 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 PFDN6O15212 129 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 BCAT2O15382 392 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ABHD2P08910 425 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 THEGLP0DJG4 465 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 GNSP15586 552 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 MSH3P20585 1137 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TEAD1P28347 426 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 CD38P28907 300 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 PPARGP37231 505 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ABCG1P45844 678 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 RABIFP47224 123 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TTPAP49638 278 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 PFN3P60673 137 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 RACK1P63244 317 aaKnown RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TCF15Q12870 199 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 GTF2H3Q13889 308 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 SLC29A2Q14542 456 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 NFATC4Q14934 902 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TYSND1Q2T9J0 566 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 KLHL38Q2WGJ6 581 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 KBTBD12Q3ZCT8 623 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TEDDM1Q5T9Z0 273 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 LYPLAL1Q5VWZ2 237 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 MARK2Q7KZI7 788 aaKnown RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ABI3BPQ7Z7G0 1075 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 NLRP8Q86W28 1048 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 DDHD1Q8NEL9 900 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 NAT14Q8WUY8 206 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 KLHDC7BQ96G42 594 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 SGSM3Q96HU1 749 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ZC3H10Q96K80 434 aaKnown RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 COPS8Q99627 209 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 BOCQ9BWV1 1114 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TEX101Q9BY14 249 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ZCCHC2Q9C0B9 1178 aaKnown RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 EPB41L4BQ9H329 900 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 MOCS1Q9NZB8 636 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TXNDC16Q9P2K2 825 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 CNOT6Q9ULM6 557 aaKnown RBP12.2□□□□□ -0.46
TRAIP-209ENST00000488860 TMEM98Q9Y2Y6 226 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 HS3ST3A1Q9Y663 406 aa12.2□□□□□ -0.46
TRAIP-209ENST00000488860 GON4LQ3T8J9 2241 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms