RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 H0Y858 1186 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 PTGESO14684 152 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 MITFO75030 526 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 RASAL1O95294 804 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 HOXD12P35452 270 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 MTHFRP42898 656 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SLC26A2P50443 739 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SERPINH1P50454 418 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SCNN1GP51170 649 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 OCA2Q04671 838 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 TMTC4Q5T4D3 741 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 FAM117BQ6P1L5 589 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 CILP2Q8IUL8 1156 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 OR52B6Q8NGF0 335 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 MTFMTQ96DP5 389 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 FEM1AQ9BSK4 669 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 RAD21L1Q9H4I0 556 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ARMC1Q9NVT9 282 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 POU2F3Q9UKI9 436 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ASB14A6NK59 587 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ARVCFO00192 962 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 BTN3A1O00481 513 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SLC22A2O15244 555 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SOAT2O75908 522 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 OR4F21O95013 312 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 GUCA1CO95843 209 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 GOT2P00505 430 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 CAPNS1P04632 268 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 HRH2P25021 359 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 HTR6P50406 440 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 KPNA2P52292 529 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 OXCT1P55809 520 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 TSPY1Q01534 308 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 CBLBQ13191 982 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 OR2T11Q8NH01 316 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 HMCESQ96FZ2 354 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 C17orf80Q9BSJ5 609 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ZFP14Q9HCL3 533 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 AMBNQ9NP70 447 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 TREX1Q9NSU2 369 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 NSMCE4AQ9NXX6 385 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ZNF229Q9UJW7 825 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 NCAM2O15394 837 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 RHOBTB1O94844 696 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 CD4P01730 458 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 HTR1BP28222 390 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 GEMP55040 296 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 IFITM3Q01628 133 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 GTDC1Q4AE62 458 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ALFQ53S48 1182 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 NDNFQ8TB73 568 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 RPL3LQ92901 407 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 GFM2Q969S9 779 aaKnown RBP12.3□□□□□ -0.44
HSPG2-211ENST00000486901 TRIM15Q9C019 465 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 ADAMTS10Q9H324 1103 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 RMI1Q9H9A7 625 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 SIAEQ9HAT2 523 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 KLQ9UEF7 1012 aa12.3□□□□□ -0.44
HSPG2-211ENST00000486901 BCAS1O75363 584 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CAPN15O75808 1086 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 S1PR4O95977 384 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 FTH1P02794 183 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CA8P35219 290 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 GPR15P49685 360 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ARPP19P56211 112 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ATP6V0D1P61421 351 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 HERVK_113P63132 956 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 TXNDC11Q6PKC3 985 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 DTWD1Q8N5C7 304 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 OR10A6Q8NH74 314 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 UBE2FQ969M7 185 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ERVK-6Q9BXR3 956 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CCDC162PA2VCL2 907 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 AP3B1O00203 1094 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 JAK1P23458 1154 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 DCKP27707 260 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 TPTEP56180 551 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CCNYL2Q5T2Q4 361 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 RANBP10Q6VN20 620 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 FBXO39Q8N4B4 442 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 PSMA8Q8TAA3 256 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ITFG1Q8TB96 612 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms