RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TRMT6Q9UJA5 497 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 BTRCQ9Y297 605 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 A0A1B0GTL3 188 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 H7C0S8 307 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 STX7O15400 261 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 AHCYL1O43865 530 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 OR1I1O60431 355 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 NIPSNAP2O75323 286 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 TSPAN12O95859 305 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 C1RP00736 705 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 LINC00032P0C843 101 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 HGFP14210 728 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 SLC7A2P52569 658 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 SIDT2Q8NBJ9 832 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 ZNF483Q8TF39 744 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 CENPKQ9BS16 269 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 NUSAP1Q9BXS6 441 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 PIDD1Q9HB75 910 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 SDR39U1Q9NRG7 319 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 MAP10Q9P2G4 905 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 AP4B1Q9Y6B7 739 aa17.85■□□□□ 0.45
PDLIM7-207ENST00000486828 C2orf78A6NCI8 922 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 SNAP91O60641 907 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 CRCPO75575 148 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 ABLIM3O94929 683 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 CAPN3P20807 821 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 NME5P56597 212 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PLD1Q13393 1074 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 LIN52Q52LA3 116 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 ZRANB3Q5FWF4 1079 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 AARS2Q5JTZ9 985 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 KIAA1841Q6NSI8 718 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PRMT9Q6P2P2 845 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 LINGO4Q6UY18 593 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 HERC6Q8IVU3 1022 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 ZNF461Q8TAF7 563 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 CD200R1Q8TD46 325 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 KCNJ9Q92806 393 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 TRMT2BQ96GJ1 504 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 SCLYQ96I15 445 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 IGSF21Q96ID5 467 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 HOPXQ9BPY8 73 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 SLC39A3Q9BRY0 314 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 CRISPLD2Q9H0B8 497 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 LHX3Q9UBR4 397 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 STOML2Q9UJZ1 356 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PCTPQ9UKL6 214 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 TMCO1Q9UM00 188 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 YIPF1Q9Y548 306 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 COMMD10Q9Y6G5 202 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 MLYCDO95822 493 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PRR35P0CG20 571 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 IDO1P14902 403 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 SLC7A1P30825 629 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 ADARP55265 1226 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 IL2P60568 153 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 TAF12Q16514 161 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 MAP7D1Q3KQU3 841 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PABPC1LQ4VXU2 614 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 FBXO48Q5FWF7 155 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 OGFOD2Q6N063 350 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 EFL1Q7Z2Z2 1120 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 PBXIP1Q96AQ6 731 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 SLCO4A1Q96BD0 722 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 ABCD2Q9UBJ2 740 aa17.84■□□□□ 0.45
PDLIM7-207ENST00000486828 NCF1BA6NI72 391 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 ENO4A6NNW6 628 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 NCF1CA8MVU1 366 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 ANGPT2O15123 496 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 STAMBPO95630 424 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 ESRRBO95718 433 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 NCF1P14598 390 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 GRIA2P42262 883 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 MRPL19P49406 292 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 AGTR2P50052 363 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 CLCN2P51788 898 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 PTPRRQ15256 657 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 VPS26BQ4G0F5 336 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 INO80DQ53TQ3 878 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 COQ5Q5HYK3 327 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 IRAK1BP1Q5VVH5 260 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 SPATA19Q7Z5L4 167 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 SYVN1Q86TM6 617 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 DHFR2Q86XF0 187 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 MINDY1Q8N5J2 469 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 EEF1AKMT1Q8WVE0 214 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 LINGO1Q96FE5 620 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 UHRF1Q96T88 793 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
PDLIM7-207ENST00000486828 H0Y626 953 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 H0YJX3 145 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 ESR1P03372 595 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 UROSP10746 265 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 MZF1P28698 734 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 PTGER3P43115 390 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 PPP3CCP48454 512 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 HK3P52790 923 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 ECT2LQ008S8 904 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 RPS6KA2Q15349 733 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms