RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PTGER3P43115 390 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 TTPAP49638 278 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 ADARP55265 1226 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 CLDN2P57739 230 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 MPP1Q00013 466 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 B4GALNT1Q00973 533 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 CTBP1Q13363 440 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 ITIH4Q14624 930 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 INPP5AQ14642 412 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 STAT4Q14765 748 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 PLK5Q496M5 336 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF789Q5FWF6 425 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 GPRC6AQ5T6X5 926 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 RNF187Q5TA31 235 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LYPLAL1Q5VWZ2 237 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 PACS1Q6VY07 963 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LPCAT2Q7L5N7 544 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LDB1Q86U70 411 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 SERPINA9Q86WD7 417 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LRRC6Q86X45 466 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 PHYKPLQ8IUZ5 450 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 TMEFF1Q8IYR6 380 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 IQCKQ8N0W5 287 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 UHMK1Q8TAS1 419 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 SLC44A1Q8WWI5 657 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 LPGAT1Q92604 370 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.49□□□□□ -0.899e-14■■■■■ 117.7
MCF2L-227ENST00000486806 FUBP1Q96AE4 644 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 ZC3H10Q96K80 434 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 BMFQ96LC9 184 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 SLC6A18Q96N87 628 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 TCF12Q99081 682 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 PAFAH2Q99487 392 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 CPNE1Q99829 537 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 MYOCQ99972 504 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 INTS10Q9NVR2 710 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 ZDHHC3Q9NYG2 299 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 EURLQ9NYK6 297 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 FBXO5Q9UKT4 447 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 CA5BQ9Y2D0 317 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 OR1A2Q9Y585 309 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 HS3ST3A1Q9Y663 406 aa9.49□□□□□ -0.89
MCF2L-227ENST00000486806 OAS3Q9Y6K5 1087 aaKnown RBP9.49□□□□□ -0.89
MCF2L-227ENST00000486806 MYO15AQ9UKN7 3530 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 EML5Q05BV3 1969 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 A0A1W2PR77 199 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 A6NNZ2 444 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 MEI4A8MW99 385 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 TOR1BO14657 336 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 FPGTO14772 594 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 INPP4BO15327 924 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 MAP3K13O43283 966 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 OR1I1O60431 355 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 AHSGP02765 367 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 MYCLP1P12525 358 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 GP5P40197 560 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 CSE1LP55060 971 aaKnown RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 KIAA1024LP59773 190 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 CASP8Q14790 479 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 NUMA1Q14980 2115 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 RASA2Q15283 850 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 LDLRAP1Q5SW96 308 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 PEAR1Q5VY43 1037 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 SDCCAG8Q86SQ7 713 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 TRIM74Q86UV6 250 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 ZC3HC1Q86WB0 502 aaKnown RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 TDRPQ86YL5 185 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 CTAGE3PQ8IX95 158 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 RBFAQ8N0V3 343 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 SLC22A18ASQ8N1D0 253 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 DEFB119Q8N690 84 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 OTUD6BQ8N6M0 293 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 PPM1NQ8N819 430 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 OR2W6PQ8NHA6 318 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 GABPB2Q8TAK5 448 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 DCAKDQ8WVC6 231 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 SNX19Q92543 992 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 HIC2Q96JB3 615 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 SERAC1Q96JX3 654 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 BIRC8Q96P09 236 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 COPS8Q99627 209 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 LRFN3Q9BTN0 628 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 APOOQ9BUR5 198 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 TMEM109Q9BVC6 243 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 BOCQ9BWV1 1114 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 LGR4Q9BXB1 951 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 P2RY12Q9H244 342 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 FBXO6Q9NRD1 293 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 EIF2B4Q9UI10 523 aaKnown RBP9.48□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF180Q9UJW8 692 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 LRRK1Q38SD2 2015 aa9.48□□□□□ -0.89
MCF2L-227ENST00000486806 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 DYNC1I1O14576 645 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms