RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 USP28Q96RU2 1077 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 TTC1Q99614 292 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 MENTQ9BUN1 341 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 ULBP1Q9BZM6 244 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 CEP44Q9C0F1 390 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 VPS11Q9H270 941 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 ASCL3Q9NQ33 180 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC3-209ENST00000486618 TUBA8Q9NY65 449 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-209ENST00000486618 HESX1Q9UBX0 185 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 CYTH4Q9UIA0 394 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 TEKT2Q9UIF3 430 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 ERVW-1Q9UQF0 538 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 ZNF711Q9Y462 761 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 ATMQ13315 3056 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 KIF26BQ2KJY2 2108 aa6.86□□□□□ -1.31
HDAC3-209ENST00000486618 RP1P56715 2156 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TTC34A8MYJ7 566 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 XPO1O14980 1071 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 MAPK13O15264 365 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 FFAR2O15552 330 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 PAX4O43316 350 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ACSL4O60488 711 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 NOL3O60936 208 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 PPP6R2O75170 966 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 NR3C1P04150 777 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 RPSAP08865 295 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 DGKAP23743 735 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 MTIF2P46199 727 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 GIPRP48546 466 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 VAMP7P51809 220 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 INHBCP55103 352 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SLC26A5P58743 744 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 PPP2CBP62714 309 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 PPP2CAP67775 309 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ECT2LQ008S8 904 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 NFATC3Q12968 1075 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SGCGQ13326 291 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TUBA3CQ13748 450 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ELAVL3Q14576 367 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ISXQ2M1V0 245 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 FAM173BQ6P4H8 233 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 RFWD3Q6PCD5 774 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ATG14Q6ZNE5 492 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TRIM69Q86WT6 500 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TP53INP2Q8IXH6 220 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SIX6OS1Q8N1H7 587 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SCML4Q8N228 414 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 STK40Q8N2I9 435 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ARL14Q8N4G2 192 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 RNF214Q8ND24 703 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 OR52K1Q8NGK4 314 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 OR6P1Q8NGX9 317 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 WFDC5Q8TCV5 224 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 MAPK15Q8TD08 544 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 NKD1Q969G9 470 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ZBTB9Q96C00 473 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 LMLNQ96KR4 655 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 RUNDC3BQ96NL0 473 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TMEM74Q96NL1 305 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SLC46A1Q96NT5 459 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TBCBQ99426 244 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SPATA9Q9BWV2 254 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 OSBPL10Q9BXB5 764 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 BLZF1Q9H2G9 400 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ZSCAN16Q9H4T2 348 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TMEM165Q9HC07 324 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 APOBEC3GQ9HC16 384 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 NCKIPSDQ9NZQ3 722 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ARHGAP20Q9P2F6 1191 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 ITGB1BP2Q9UKP3 347 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 INTS6Q9UL03 887 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 RIMKLBQ9ULI2 386 aa6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TLN1Q9Y490 2541 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 SPTAN1Q13813 2472 aaKnown RBP6.85□□□□□ -1.31
HDAC3-209ENST00000486618 TRPM6Q9BX84 2022 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 GOLGA6L7A0A1B0GV03 622 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 A0A1B0GVM2 712 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 YJEFN3A6XGL0 299 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 E7ENQ6 273 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 MSI1O43347 362 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 THAP12O43422 761 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PLRG1O43660 514 aaKnown RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CALUO43852 315 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CUTAO60888 179 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 HEXBP07686 556 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ZSCAN22P10073 491 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 CYP2A6P11509 494 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-209ENST00000486618 ATP1A3P13637 1013 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 PDGFRAP16234 1089 aa6.84□□□□□ -1.31
HDAC3-209ENST00000486618 MAT2AP31153 395 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms