RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ZNF358Q9NW07 568 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 CNTN6Q9UQ52 1028 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TTC24A2A3L6 582 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 CCNA2P20248 432 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PRDX6P30041 224 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 HCAR3P49019 387 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 RAD23AP54725 363 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DMPKQ09013 629 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 FAM124AQ86V42 546 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TMEM209Q96SK2 561 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TXLNGYQ9BZA5 131 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 ADAM7Q9H2U9 754 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 LIMD1Q9UGP4 676 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PADI4Q9UM07 663 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 POMPQ9Y244 141 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 HS3ST4Q9Y661 456 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PRRC2BQ5JSZ5 2229 aaKnown RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 QSOX1O00391 747 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 SOCS7O14512 581 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 GATMP50440 423 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 CYP4F8P98187 520 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DGUOKQ16854 277 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 ZNF621Q6ZSS3 439 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DNAJB7Q7Z6W7 309 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 SYT12Q8IV01 421 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DNAJB14Q8TBM8 379 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DCAKDQ8WVC6 231 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 COMMD8Q9NX08 183 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 DNAJC28Q9NX36 388 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 MIOSQ9NXC5 875 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 WDR47O94967 919 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 SLC25A14O95258 325 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 GOT2P00505 430 aaKnown RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 ASLP04424 464 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PEX6Q13608 980 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 MPP2Q14168 576 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PRKD1Q15139 912 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TCEA2Q15560 299 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 SFRP1Q8N474 314 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 VPS33AQ96AX1 596 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TCF12Q99081 682 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TRMOQ9BU70 441 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 RAD21L1Q9H4I0 556 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 TEX264Q9Y6I9 313 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 NPEPPSL1A6NEC2 478 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 CACNB4O00305 520 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 PENKP01210 267 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 TNNI3P19429 210 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 S100A1P23297 94 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 MAPK10P53779 464 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 RUNX1T1Q06455 604 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 MOGSQ13724 837 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 FAM98BQ52LJ0 330 aaKnown RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 RAB6CQ53S08 254 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 ATXN7L2Q5T6C5 722 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 AHI1Q8N157 1196 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 FSTL5Q8N475 847 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 FAM47BQ8NA70 645 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 RAB6CQ9H0N0 254 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 SPAG4Q9NPE6 437 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 PPM1HQ9ULR3 514 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 CAB39Q9Y376 341 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 J3KR12 359 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 KPNA5O15131 536 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 SNAP91O60641 907 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 OAS1P00973 400 aaKnown RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 EPHX1P07099 455 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 HPGDP15428 266 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 UPP1Q16831 310 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 C6orf52Q5T4I8 152 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 C17orf99Q6UX52 265 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 PLD4Q96BZ4 506 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 MYOCQ99972 504 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 SMOC2Q9H3U7 446 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 NDRG2Q9UN36 371 aaKnown RBP10.96□□□□□ -0.65
HDAC6-228ENST00000486227 SNX8Q9Y5X2 465 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 GMEB1Q9Y692 573 aa10.96□□□□□ -0.65
HDAC6-228ENST00000486227 LRP5O75197 1615 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 GLYATL1P3A0A0U1RQE8 302 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 ELFN1P0C7U0 828 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF12P17014 697 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 MSX2P35548 267 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 CCT8P50990 548 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 RPL38P63173 70 aaKnown RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 PAFAH1B3Q15102 231 aaKnown RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 CYP2A13Q16696 494 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 BROXQ5VW32 411 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 RSBN1Q5VWQ0 802 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-228ENST00000486227 LYPLAL1Q5VWZ2 237 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 DCBLD1Q8N8Z6 715 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 LEMD2Q8NC56 503 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 FLCNQ8NFG4 579 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 BRSK1Q8TDC3 778 aa10.96□□□□□ -0.66
HDAC6-228ENST00000486227 HERPUD2Q9BSE4 406 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms