RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 WNT3AP56704 352 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 PPARDQ03181 441 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 CCDC38Q502W7 563 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 FNBP1LQ5T0N5 605 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 LIPIQ6XZB0 460 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 ZSWIM9Q86XI8 627 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 IPMKQ8NFU5 416 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 MRGPRX2Q96LB1 330 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 APOLD1Q96LR9 279 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 NRSN2Q9GZP1 204 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 ARNT2Q9HBZ2 717 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 UBP1Q9NZI7 540 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 APOBEC3BQ9UH17 382 aaKnown RBP16.96■□□□□ 0.31
VIM-205ENST00000485947 PPIL1Q9Y3C6 166 aa16.96■□□□□ 0.31
VIM-205ENST00000485947 FREM2Q5SZK8 3169 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ASH1LQ9NR48 2969 aaKnown RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 TNFRSF10CO14798 259 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 PMPCBO75439 489 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 RECQL5O94762 991 aaPredicted RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 TTC4O95801 387 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 EPOP01588 193 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ALPIP09923 528 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 CYP2A6P11509 494 aaPredicted RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 HSD17B3P37058 310 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 RALGDSQ12967 914 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 NFATC4Q14934 902 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ELOCQ15369 112 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 CCDC157Q569K6 752 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 CCNJLQ8IV13 435 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ZBED8Q8IZ13 594 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 PHACTR4Q8IZ21 702 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.95■□□□□ 0.3
VIM-205ENST00000485947 DNAAF3Q8N9W5 541 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 OR52K1Q8NGK4 314 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 PYROXD1Q8WU10 500 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 UBLCP1Q8WVY7 318 aaPredicted RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 SCG3Q8WXD2 468 aaKnown RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 GRAMD1AQ96CP6 724 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 NXPE2Q96DL1 559 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 APOOQ9BUR5 198 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 FICDQ9BVA6 458 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 FUT8Q9BYC5 575 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 ACBD3Q9H3P7 528 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 NOD2Q9HC29 1040 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 BFARQ9NZS9 450 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 TEX264Q9Y6I9 313 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 DGKBQ9Y6T7 804 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 HELZ2Q9BYK8 2649 aaKnown RBP16.95■□□□□ 0.3
VIM-205ENST00000485947 PTPRBP23467 1997 aa16.95■□□□□ 0.3
VIM-205ENST00000485947 LOC285095A0A1B0GVY8 99 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 TRABD2BA6NFA1 517 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 SDR42E2A6NKP2 422 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 MAP2K7O14733 419 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 FFAR2O15552 330 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 RIPK2O43353 540 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 SPAG6O75602 509 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 RASGRP1O95267 797 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 GSTA2P09210 222 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 HLA-DPA1P20036 260 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 TEAD1P28347 426 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 TRIM23P36406 574 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 GRIA1P42261 906 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 HK3P52790 923 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 KIAA1024LP59773 190 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 CDK18Q07002 472 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 SPARCL1Q14515 664 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 INPP5AQ14642 412 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 MSS51Q4VC12 460 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 ZNF542PQ5EBM4 170 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 TPRG1LQ5T0D9 272 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 ARMC12Q5T9G4 340 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 HES3Q5TGS1 186 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 ESRP1Q6NXG1 681 aaKnown RBP16.94■□□□□ 0.3
VIM-205ENST00000485947 USP45Q70EL2 814 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 DCBLD1Q8N8Z6 715 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 FBXO36Q8NEA4 188 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 WDR48Q8TAF3 677 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 NAT6Q93015 286 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 SIGLEC10Q96LC7 697 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 MCCC1Q96RQ3 725 aaPredicted RBP16.94■□□□□ 0.3
VIM-205ENST00000485947 NINJ2Q9NZG7 142 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 KLF15Q9UIH9 416 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 CLCA2Q9UQC9 943 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 PCDHGC4Q9Y5F7 938 aa16.94■□□□□ 0.3
VIM-205ENST00000485947 CACNB4O00305 520 aaPredicted RBP16.93■□□□□ 0.3
VIM-205ENST00000485947 PGLSO95336 258 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 CPP00450 1065 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 FGF1P05230 155 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 ANXA6P08133 673 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 ABHD2P08910 425 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 VIPR1P32241 457 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 ELK3P41970 407 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 RPL26P61254 145 aaKnown RBP16.93■□□□□ 0.3
VIM-205ENST00000485947 UAP1Q16222 522 aaPredicted RBP16.93■□□□□ 0.3
VIM-205ENST00000485947 PCSK7Q16549 785 aa16.93■□□□□ 0.3
VIM-205ENST00000485947 PRRT3Q5FWE3 981 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms