RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SRP72O76094 671 aaKnown RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 FUCA1P04066 466 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 ITGALP20701 1170 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 ADRA1DP25100 572 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 MGAT1P26572 445 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 AKT1P31749 480 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 MC4RP32245 332 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CA5AP35218 305 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 MAGEA6P43360 314 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 ARSDP51689 593 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 MRPS25P82663 173 aaKnown RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 XIAPP98170 497 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CKAP4Q07065 602 aaKnown RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 LAMB3Q13751 1172 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 GTF2H3Q13889 308 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 ELOCQ15369 112 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 SKIDA1Q1XH10 827 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 KHDC1Q4VXA5 237 aaKnown RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 PPM1JQ5JR12 505 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TSTD2Q5T7W7 516 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 IZUMO3Q5VZ72 239 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 LRRC8BQ6P9F7 803 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TAF8Q7Z7C8 310 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 GALNT13Q8IUC8 556 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 PPIL6Q8IXY8 311 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 OR4C6Q8NH72 309 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CCL4L1Q8NHW4 92 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 BAHD1Q8TBE0 780 aaPredicted RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 ZNF398Q8TD17 642 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 STYXQ8WUJ0 223 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TBATAQ96M53 351 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 VPS35Q96QK1 796 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 RANBP9Q96S59 729 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TRIM31Q9BZY9 425 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 FAM96AQ9H5X1 160 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 SYBUQ9NX95 663 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 NLGN3Q9NZ94 848 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 ATXN10Q9UBB4 475 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 ZNHIT2Q9UHR6 403 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CRLS1Q9UJA2 301 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CDC23Q9UJX2 597 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TCAF1Q9Y4C2 921 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 CSNK1G3Q9Y6M4 447 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 SLC30A1Q9Y6M5 507 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 MROH6A6NGR9 719 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 OR51F1A6NGY5 319 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 LMO7DNF2Z398 122 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 DNAJC6O75061 913 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 CBFA2T3O75081 653 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 AVILO75366 819 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 LDOC1O95751 146 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 TUBB4AP04350 444 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 GIMD1P0DJR0 217 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 CEACAM1P13688 526 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 ZNF8P17098 575 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 AK4P27144 223 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 NPY2RP49146 381 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 SIM1P81133 766 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 DAB2P98082 770 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 ILF3Q12906 894 aaKnown RBP eCLIP11.72□□□□□ -0.53
HPS4-214ENST00000485842 NFATC2Q13469 925 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 PEX6Q13608 980 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 TRIP6Q15654 476 aaKnown RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 PYCR3Q53H96 274 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 PCID2Q5JVF3 399 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 LDLRAP1Q5SW96 308 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 RNASEH2BQ5TBB1 312 aaKnown RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 SLC30A9Q6PML9 568 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 CRTC3Q6UUV7 619 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 NLRP9Q7RTR0 991 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 TAS2R42Q7RTR8 314 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 DGLUCYQ7Z3D6 616 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 SNX20Q7Z614 316 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 ADGRG6Q86SQ4 1221 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 GKN2Q86XP6 184 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 NAT8LQ8N9F0 302 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 DDHD1Q8NEL9 900 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 DTX3LQ8TDB6 740 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 CDKN2AIPNLQ96HQ2 116 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 ZNF778Q96MU6 729 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 TTC25Q96NG3 672 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 CDC6Q99741 560 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 GSDMCQ9BYG8 508 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 TRIM39Q9HCM9 518 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 XAB2Q9HCS7 855 aaKnown RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 SIRPGQ9P1W8 387 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 SLC2A6Q9UGQ3 507 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 PLEKHM1Q9Y4G2 1056 aa11.72□□□□□ -0.53
HPS4-214ENST00000485842 PCYT1BQ9Y5K3 369 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 ARID1BQ8NFD5 2236 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 COL5A1P20908 1838 aaPredicted RBP11.72□□□□□ -0.53
HPS4-214ENST00000485842 CCDC162PA2VCL2 907 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms