RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FRMD8Q9BZ67 464 aaPredicted RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 CARD9Q9H257 536 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 SLC32A1Q9H598 525 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PCDH9Q9HC56 1237 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 MRPL40Q9NQ50 206 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 NLGN3Q9NZ94 848 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 TRHDEQ9UKU6 1024 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 DNPEPQ9ULA0 475 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 CHKBQ9Y259 395 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 SLC17A4Q9Y2C5 497 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 MSRB2Q9Y3D2 182 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PLEKHM1Q9Y4G2 1056 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 OR1A2Q9Y585 309 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 OAS3Q9Y6K5 1087 aaKnown RBP5.7□□□□□ -1.5
CUX1-208ENST00000485792 FAM208BQ5VWN6 2430 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 PCSK5Q92824 1860 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 IGSF10Q6WRI0 2623 aa5.7□□□□□ -1.5
CUX1-208ENST00000485792 EME2A4GXA9 379 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 TAF4O00268 1085 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NEMP1O14524 444 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 SIGLEC6O43699 453 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 KRT86O43790 486 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 HYAL3O43820 417 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 ZNF189O75820 626 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 TJP3O95049 919 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 CLDN7O95471 211 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NDST3O95803 873 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 GP1BAP07359 652 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ELFN1P0C7U0 828 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 RBP3P10745 1247 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 NFKB1P19838 968 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 MPSTP25325 297 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NFKBIAP25963 317 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 RBL1P28749 1068 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 HMGCLP35914 325 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ETV3P41162 512 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 CD86P42081 329 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 SPINT3P49223 89 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ARSDP51689 593 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 AP1B1Q10567 949 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 PDE1CQ14123 709 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 PTK2BQ14289 1009 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NR1D2Q14995 579 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ALG11Q2TAA5 492 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ZNF648Q5T619 568 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 CDCP2Q5VXM1 449 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 KAZNQ674X7 775 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 LRRC66Q68CR7 880 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 PDPK2PQ6A1A2 396 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 USP45Q70EL2 814 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ZNF534Q76KX8 674 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 PEX26Q7Z412 305 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ADAT2Q7Z6V5 191 aaKnown RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 KIAA1328Q86T90 577 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 TTC30BQ8N4P2 665 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ZNF548Q8NEK5 533 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 GPBAR1Q8TDU6 330 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 BTN2A2Q8WVV5 523 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 SCAMP4Q969E2 229 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 WDR92Q96MX6 357 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 AGAP3Q96P47 875 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 SRPK1Q96SB4 655 aaKnown RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 FRMD8P1Q9BZ68 369 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 TSGA10Q9BZW7 698 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 CDH19Q9H159 772 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ABCG8Q9H221 673 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 GBA3Q9H227 469 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 BRD7Q9NPI1 651 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 KCND1Q9NSA2 647 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 HAUS2Q9NVX0 235 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 GULP1Q9UBP9 304 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 CD84Q9UIB8 345 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 TTC7AQ9ULT0 858 aaPredicted RBP5.69□□□□□ -1.5
CUX1-208ENST00000485792 PPP2R2CQ9Y2T4 447 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NEUROG3Q9Y4Z2 214 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 KCTD3Q9Y597 815 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 ZFYVE26Q68DK2 2539 aa5.69□□□□□ -1.5
CUX1-208ENST00000485792 NEMP2A6NFY4 417 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 C1QTNF9BB2RNN3 333 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 CCL22O00626 93 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 CHUKO15111 745 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 YY2O15391 372 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 AQP9O43315 295 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 SGTAO43765 313 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 DNAJC6O75061 913 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 METTL18O95568 372 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 PCCBP05166 539 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 PYGLP06737 847 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 ITGAVP06756 1048 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 IVLP07476 585 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 F7P08709 466 aaPredicted RBP5.68□□□□□ -1.5
CUX1-208ENST00000485792 CCDC175P0C221 793 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 C1QTNF9P0C862 333 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 PRSS56P0CW18 603 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 ETS1P14921 441 aa5.68□□□□□ -1.5
CUX1-208ENST00000485792 CKMT2P17540 419 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms