RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ARGLU1Q9NWB6 273 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 ZFATQ9P243 1243 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 OR1A2Q9Y585 309 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 SLCO1B1Q9Y6L6 691 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 BPTFQ12830 3046 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 H0Y8X5 98 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 DLL1O00548 723 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 TOR1BO14657 336 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PIAS1O75925 651 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 SLC25A14O95258 325 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 HOXC4P09017 264 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PMLP29590 882 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PPARGP37231 505 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 SLC1A2P43004 574 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 TTPAP49638 278 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PFN3P60673 137 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 CDK3Q00526 305 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 CTBP1Q13363 440 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 DBN1Q16643 649 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 TYSND1Q2T9J0 566 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 LDLRAP1Q5SW96 308 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 GPRC6AQ5T6X5 926 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 KYAT3Q6YP21 454 aaKnown RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 ABI3BPQ7Z7G0 1075 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PHYKPLQ8IUZ5 450 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 C2CD4AQ8NCU7 369 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 C1orf216Q8TAB5 229 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 FAM174AQ8TBP5 190 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 SCG3Q8WXD2 468 aaKnown RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 FUBP1Q96AE4 644 aaKnown RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 COX14Q96I36 57 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 TCF12Q99081 682 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 CYTH2Q99418 400 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 TTC1Q99614 292 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PRRX2Q99811 253 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 AASDHPPTQ9NRN7 309 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 PHPT1Q9NRX4 125 aaPredicted RBP17.42■□□□□ 0.38
CHMP3-207ENST00000485465 ZDHHC3Q9NYG2 299 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 SLC17A6Q9P2U8 582 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 FBXO5Q9UKT4 447 aa17.42■□□□□ 0.38
CHMP3-207ENST00000485465 A6NNZ2 444 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 S1PR4O95977 384 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 ITPKAP23677 461 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 YPEL5P62699 121 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 RACK1P63244 317 aaKnown RBP17.41■□□□□ 0.38
CHMP3-207ENST00000485465 NAB1Q13506 487 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 EFTUD2Q15029 972 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHMP3-207ENST00000485465 KLHL38Q2WGJ6 581 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 Q6ZSR6 202 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 KIAA0408Q6ZU52 694 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 SLC26A11Q86WA9 606 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 CTAGE3PQ8IX95 158 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 DDHD1Q8NEL9 900 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 GDAP1Q8TB36 358 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 COPS8Q99627 209 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 LGR4Q9BXB1 951 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 TM9SF3Q9HD45 589 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 NSMCE4AQ9NXX6 385 aa17.41■□□□□ 0.38
CHMP3-207ENST00000485465 IGLV3-16A0A075B6K0 115 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 A0A1W2PR77 199 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 CACNB4O00305 520 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 PFDN6O15212 129 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 NDUFS3O75489 264 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 F7P08709 466 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 MYCLP1P12525 358 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 RABIFP47224 123 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 KIAA1024LP59773 190 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 MPP1Q00013 466 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 ITIH4Q14624 930 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 KHDC1Q4VXA5 237 aaKnown RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 ZNF648Q5T619 568 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 RNF187Q5TA31 235 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 ZC3H14Q6PJT7 736 aaKnown RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 PRR23BQ6ZRT6 265 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 MARK2Q7KZI7 788 aaKnown RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 GALNT7Q86SF2 657 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 TRIM74Q86UV6 250 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 PPM1NQ8N819 430 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 MFSD2AQ8NA29 543 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 PRSS33Q8NF86 280 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 OR13H1Q8NG92 308 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 HEXDCQ8WVB3 486 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 TRIM39Q9HCM9 518 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 FBXO6Q9NRD1 293 aaPredicted RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 INTS10Q9NVR2 710 aaKnown RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 VPS18Q9P253 973 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 PSAT1Q9Y617 370 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 OAS3Q9Y6K5 1087 aaKnown RBP17.4■□□□□ 0.38
CHMP3-207ENST00000485465 R4GN57 208 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 DOCK9Q9BZ29 2069 aa17.4■□□□□ 0.38
CHMP3-207ENST00000485465 OR1I1O60431 355 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 MTX2O75431 263 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 AHSGP02765 367 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 SHBGP04278 402 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 MSH3P20585 1137 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 GABRB3P28472 473 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 CD38P28907 300 aa17.39■□□□□ 0.37
CHMP3-207ENST00000485465 AKT1P31749 480 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms