RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 EXTL1Q92935 676 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 SRPK1Q96SB4 655 aaKnown RBP11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ARHGAP9Q9BRR9 750 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ZPBPQ9BS86 351 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
SCFD1-206ENST00000484733 TRIM39Q9HCM9 518 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 OCIAD1Q9NX40 245 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 TMEM9Q9P0T7 183 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 B3GALT1Q9Y5Z6 326 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 SDK2Q58EX2 2172 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 KCNK1O00180 336 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 AGRPO00253 132 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 GRID2O43424 1007 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 F3P13726 295 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ITGB6P18564 788 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 PTMSP20962 102 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 MESDQ14696 234 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 NT5DC3Q86UY8 548 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 TRAM1L1Q8N609 369 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 SLC35G2Q8TBE7 412 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ART4Q93070 314 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 EID2BQ96D98 161 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 OLFM3Q96PB7 478 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ZSCAN5AQ9BUG6 496 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 SLC25A51Q9H1U9 297 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ZFYVE1Q9HBF4 777 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 FBXO8Q9NRD0 319 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
SCFD1-206ENST00000484733 TRBV23OR9-2A0A075B6M9 112 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 LILRA5A6NI73 299 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 EFCAB7A8K855 629 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 APOL1O14791 398 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-206ENST00000484733 CBFA2T2O43439 604 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 UGT1A3P35503 534 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF569Q5MCW4 686 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 HTR3CQ8WXA8 447 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 PMEPA1Q969W9 287 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 MAK16Q9BXY0 300 aaKnown RBP11.33□□□□□ -0.6
SCFD1-206ENST00000484733 ADNPQ9H2P0 1102 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 GEMIN8Q9NWZ8 242 aaKnown RBP11.33□□□□□ -0.6
SCFD1-206ENST00000484733 PRKAB1Q9Y478 270 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 KALRNO60229 2985 aa11.33□□□□□ -0.6
SCFD1-206ENST00000484733 LRRD1A4D1F6 860 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 PPP1R12AO14974 1030 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 CHUKO15111 745 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 SLC28A2O43868 658 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 RAD1O60671 282 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ACP5P13686 325 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF8P17098 575 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 XRCC1P18887 633 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 MPSTP25325 297 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 SLC1A1P43005 524 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 UBE2IP63279 158 aaKnown RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ZFYVE27Q5T4F4 411 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ADGRG6Q86SQ4 1221 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ZNHIT6Q9NWK9 470 aaKnown RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 DDX56Q9NY93 547 aaKnown RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 KCNK6Q9Y257 313 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 MN1Q10571 1320 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 PRR19A6NJB7 356 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ANKRD34CP0C6C1 535 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 MAP4P27816 1152 aaKnown RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 CDK18Q07002 472 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 AP1B1Q10567 949 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 GALNT3Q14435 633 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 CEACAM20Q6UY09 585 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 CACNA2D3Q8IZS8 1091 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 GPR26Q8NDV2 337 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 DTX3LQ8TDB6 740 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 RTP4Q96DX8 246 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 TIMM29Q9BSF4 260 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 SPATA16Q9BXB7 569 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 CPNE7Q9UBL6 633 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 PILRAQ9UKJ1 303 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
SCFD1-206ENST00000484733 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-206ENST00000484733 VEGFDO43915 354 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 AKR1B10O60218 316 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 WISP1O95388 367 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 C9P02748 559 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 LIFP15018 202 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 NFATC3Q12968 1075 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 NFATC2Q13469 925 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 MAP7Q14244 749 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 TAZQ16635 292 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 TEX44Q53QW1 395 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
SCFD1-206ENST00000484733 IL22RA1Q8N6P7 574 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms