RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GNPDA1P46926 289 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 RPIAP49247 311 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 DUSP3P51452 185 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-208ENST00000484246 PEX6Q13608 980 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 LAMB3Q13751 1172 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 DOK6Q6PKX4 331 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 FAM151BQ6UXP7 276 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 ADGRG6Q86SQ4 1221 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 C17orf82Q86X59 251 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-208ENST00000484246 NRROSQ86YC3 692 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 GALNT13Q8IUC8 556 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 SLC35F3Q8IY50 421 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-208ENST00000484246 OR52K1Q8NGK4 314 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 STYXQ8WUJ0 223 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 GLMNQ92990 594 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 NLE1Q9NVX2 485 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-208ENST00000484246 ATXN10Q9UBB4 475 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 PCYOX1Q9UHG3 505 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 EME2A4GXA9 379 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 BUD23O43709 281 aaKnown RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 SRP72O76094 671 aaKnown RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 GAS8O95995 478 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 LMAN1P49257 510 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 CLCNKAP51800 687 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 ACVR1Q04771 509 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 DNAJC3Q13217 504 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 NFATC2Q13469 925 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 KCNJ11Q14654 390 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 NR0B2Q15466 257 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 LDLRAP1Q5SW96 308 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 PPP1R21Q6ZMI0 780 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 GPR156Q8NFN8 814 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 NAT6Q93015 286 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 ZCCHC2Q9C0B9 1178 aaKnown RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 FKBPLQ9UIM3 349 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 MOSPD1Q9UJG1 213 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 DOLKQ9UPQ8 538 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 PCYT1BQ9Y5K3 369 aaPredicted RBP15.72■□□□□ 0.11
UPF3A-208ENST00000484246 ST14Q9Y5Y6 855 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 SCN8AQ9UQD0 1980 aa15.72■□□□□ 0.11
UPF3A-208ENST00000484246 HEATR9A2RTY3 570 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 FAM221BA6H8Z2 402 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 PRR19A6NJB7 356 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 KRT37O76014 449 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ASMTLO95671 621 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ECEL1O95672 775 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 KRT14P02533 472 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ZNF8P17098 575 aaPredicted RBP15.71■□□□□ 0.11
UPF3A-208ENST00000484246 GRIA1P42261 906 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 DAB2P98082 770 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 CTBSQ01459 385 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 POU6F1Q14863 301 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 SMAD1Q15797 465 aaKnown RBP15.71■□□□□ 0.11
UPF3A-208ENST00000484246 GPR33Q49SQ1 333 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 KHDC1Q4VXA5 237 aaKnown RBP15.71■□□□□ 0.11
UPF3A-208ENST00000484246 GPRC6AQ5T6X5 926 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ZNF534Q76KX8 674 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 NLRP9Q7RTR0 991 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 CACTIN-AS1Q8N1I8 211 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
UPF3A-208ENST00000484246 DNAAF3Q8N9W5 541 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 KYQ8NBH2 561 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 OR6C4Q8NGE1 309 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 CCL4L1Q8NHW4 92 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ZNF398Q8TD17 642 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 ULK4Q96C45 1275 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 DNAJC1Q96KC8 554 aaKnown RBP15.71■□□□□ 0.11
UPF3A-208ENST00000484246 RUNDC3BQ96NL0 473 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 GPR34Q9UPC5 381 aa15.71■□□□□ 0.11
UPF3A-208ENST00000484246 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 TRBV5-4A0A0C4DH59 114 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 CCDC188H7C350 402 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 GPR39O43194 453 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 GRID2O43424 1007 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 NOBOXO60393 691 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 TPH1P17752 444 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 ITGALP20701 1170 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 ADRA1DP25100 572 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 E2F1Q01094 437 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 GPS1Q13098 491 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 LRRC8BQ6P9F7 803 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 MARK2Q7KZI7 788 aaKnown RBP15.7■□□□□ 0.1
UPF3A-208ENST00000484246 SNX20Q7Z614 316 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 MCUQ8NE86 351 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 SGSM3Q96HU1 749 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 TIMM29Q9BSF4 260 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 IL22Q9GZX6 179 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 OR2AG1Q9H205 316 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 TAAR2Q9P1P5 351 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 TCAF1Q9Y4C2 921 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 NEUROG3Q9Y4Z2 214 aa15.7■□□□□ 0.1
UPF3A-208ENST00000484246 NCOR2Q9Y618 2525 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms