RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 TOR1BO14657 336 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 GABRDO14764 452 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 DAG1Q14118 895 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 BCL2A1Q16548 175 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 ANKRD34AQ69YU3 496 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 ZNF549Q6P9A3 640 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 KDELC1Q6UW63 502 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 APOBEC3FQ8IUX4 373 aaKnown RBP19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 NRBF2Q96F24 287 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 PCED1BQ96HM7 432 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 DGCR6LQ9BY27 220 aa19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 GPC6Q9Y625 555 aaPredicted RBP19.64■□□□□ 0.74
RPUSD3-216ENST00000484134 SLC25A27O95847 323 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 THRBP10828 461 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 IST1P53990 364 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 EEFSECP57772 596 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 SNX17Q15036 470 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 SKIV2LQ15477 1246 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 MEP1AQ16819 746 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 CCDC92Q53HC0 331 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 STK32CQ86UX6 486 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 PDZD8Q8NEN9 1154 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 ZNF641Q96N77 438 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 TOR3AQ9H497 397 aa19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 TIMM13Q9Y5L4 95 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-216ENST00000484134 NYNRINQ9P2P1 1898 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 KCNE1P15382 129 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 IL12AP29459 219 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 EEF1DP29692 281 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 KCNK10P57789 538 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CTU2Q2VPK5 515 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 LAIR2Q6ISS4 152 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 SCIMPQ6UWF3 145 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 PPTC7Q8NI37 304 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 AKIP1Q9NQ31 210 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 E2F6O75461 281 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 EEDO75530 441 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CNTN5O94779 1100 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CYBBP04839 570 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 ZNF135P52742 658 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CTF1Q16619 201 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 TIGD2Q4W5G0 525 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 GLYATQ6IB77 296 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 PARP8Q8N3A8 854 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CHDHQ8NE62 594 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 PABPC5Q96DU9 382 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CYP2S1Q96SQ9 504 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 SMURF2Q9HAU4 748 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 RGS18Q9NS28 235 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 GIT1Q9Y2X7 761 aa19.63■□□□□ 0.73
RPUSD3-216ENST00000484134 CAPN15O75808 1086 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 INMTO95050 263 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 PRSS23O95084 383 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 UGT2B4P06133 528 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 HTR1EP28566 365 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 PRDX3P30048 256 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 SLC26A3P40879 764 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 SERPINH1P50454 418 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 ZNF846Q147U1 533 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 CRY1Q16526 586 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 FXNQ16595 210 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 AASDHQ4L235 1098 aaPredicted RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 XKR4Q5GH76 650 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 RBM48Q5RL73 367 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 CLEC4FQ8N1N0 589 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 TMEM199Q8N511 208 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 ZFP90Q8TF47 636 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 HERC2P3Q9BVR0 1158 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 SEMA4BQ9NPR2 832 aaPredicted RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 AIG1Q9NVV5 245 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 TMED5Q9Y3A6 229 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 AGXTP21549 392 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 PIGAP37287 484 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 SELPLGQ14242 412 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 C6orf141Q5SZD1 244 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 TFAP2DQ7Z6R9 452 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 HS3ST5Q8IZT8 346 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 DTWD1Q8N5C7 304 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 NUDT8Q8WV74 236 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 TMEM40Q8WWA1 233 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 AMBRA1Q9C0C7 1298 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 CARS2Q9HA77 564 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 ARNT2Q9HBZ2 717 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 PCDHB3Q9Y5E6 796 aa19.62■□□□□ 0.73
RPUSD3-216ENST00000484134 POLR2AP24928 1970 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 OXSR1O95747 527 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 PRR35P0CG20 571 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 CDH1P12830 882 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 FDXRP22570 491 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 ADCYAP1R1P41586 468 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 MAXP61244 160 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 TAF2Q6P1X5 1199 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 RBM23Q86U06 439 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 C8orf59Q8N0T1 100 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 TSPEARQ8WU66 669 aa19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 HDAC2Q92769 488 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-216ENST00000484134 MUL1Q969V5 352 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms