RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 POU3F3P20264 500 aaPredicted RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 ACRV1P26436 265 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 SPINT3P49223 89 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 HK2P52789 917 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 KDSRQ06136 332 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 CTSL3PQ5NE16 218 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 GPR26Q8NDV2 337 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 OR8D1Q8WZ84 308 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 SKA1Q96BD8 255 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 ULK4Q96C45 1275 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 SORT1Q99523 831 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TRMT61BQ9BVS5 477 aaKnown RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 CLPBQ9H078 707 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 ZFP69BQ9UJL9 534 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 OR1I1O60431 355 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TFEBP19484 476 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TARSP26639 723 aaKnown RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 DCDC1P59894 354 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 MESP2Q0VG99 397 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 GRM2Q14416 872 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 ELAVL3Q14576 367 aaKnown RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 CHRNA6Q15825 494 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 ITPRIPL2Q3MIP1 535 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 SETMARQ53H47 684 aaPredicted RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 PIWIL4Q7Z3Z4 852 aaKnown RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 MSLNLQ96KJ4 702 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TMEM120AQ9BXJ8 343 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 PRO3102Q9H379 93 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 CLDND1Q9NY35 253 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 CRLS1Q9UJA2 301 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TRMT6Q9UJA5 497 aaKnown RBP26.04■■□□□ 1.76
SHOX2-204ENST00000483851 A0A0G2JND7 137 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 TBC1D3BA6NDS4 549 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 NPHS1O60500 1241 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 C1SP09871 688 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 XPAP23025 273 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-204ENST00000483851 GRIA2P42262 883 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 DLX2Q07687 328 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-204ENST00000483851 ICE2Q659A1 982 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 PARM1Q6UWI2 310 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 NAPRTQ6XQN6 538 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 DPPA4Q7L190 304 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 NXPE1Q8N323 547 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 FGF14Q92915 247 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 GPR21Q99679 349 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 KXD1Q9BQD3 176 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 ZNF395Q9H8N7 513 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-204ENST00000483851 CD248Q9HCU0 757 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 GTSE1Q9NYZ3 720 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 GNPTGQ9UJJ9 305 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 HAO1Q9UJM8 370 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 FAM50BQ9Y247 325 aa26.03■■□□□ 1.76
SHOX2-204ENST00000483851 TMEM265A0A087WTH1 108 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 C16orf96A6NNT2 1141 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 SP100P23497 879 aaPredicted RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 GDI1P31150 447 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 NFKB2Q00653 900 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 ZNF234Q14588 700 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 C9orf64Q5T6V5 341 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 PAQR3Q6TCH7 311 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 TTC7BQ86TV6 843 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 PCDH12Q9NPG4 1184 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 NCKIPSDQ9NZQ3 722 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 THAP10Q9P2Z0 257 aaPredicted RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 EPS15L1Q9UBC2 864 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 HEY2Q9UBP5 337 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 LNPEPQ9UIQ6 1025 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 DNAJC16Q9Y2G8 782 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 A8MX80 341 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 E5RI56 91 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 IPO13O94829 963 aaKnown RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 HSPA4LO95757 839 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 MNAT1P51948 309 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 RCN2Q14257 317 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 HSF5Q4G112 596 aaPredicted RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 SWT1Q5T5J6 900 aaKnown RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 FAM91A1Q658Y4 838 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 ERAP2Q6P179 960 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 KIAA1191Q96A73 305 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 WWP1Q9H0M0 922 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 POMKQ9H5K3 350 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 SUN2Q9UH99 717 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 PPM1HQ9ULR3 514 aa26.02■■□□□ 1.76
SHOX2-204ENST00000483851 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.02■■□□□ 1.76
SHOX2-204ENST00000483851 PSMD11O00231 422 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 LYPLA1O75608 230 aaPredicted RBP26.01■■□□□ 1.75
SHOX2-204ENST00000483851 KAT7O95251 611 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 ALOX15P16050 662 aaPredicted RBP26.01■■□□□ 1.75
SHOX2-204ENST00000483851 ITGB7P26010 798 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 PDLIM5Q96HC4 596 aaKnown RBP26.01■■□□□ 1.75
SHOX2-204ENST00000483851 MTG2Q9H4K7 406 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 ZDHHC3Q9NYG2 299 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 DHRS7Q9Y394 339 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 MTCH2Q9Y6C9 303 aa26.01■■□□□ 1.75
SHOX2-204ENST00000483851 ARNTLO00327 626 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 NPC1O15118 1278 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 ZBTB14O43829 449 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 CHRM3P20309 590 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 LTBRP36941 435 aa26■■□□□ 1.75
SHOX2-204ENST00000483851 NSG1P42857 185 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms