RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CLCA4Q14CN2 919 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 PCSK7Q16549 785 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 KHDC1Q4VXA5 237 aaKnown RBP17.82■□□□□ 0.44
ATG4B-221ENST00000483778 ANKS6Q68DC2 871 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 AGBL5Q8NDL9 886 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 NCSTNQ92542 709 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 RNF31Q96EP0 1072 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 CTRCQ99895 268 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 TBC1D10AQ9BXI6 508 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 SPRY4Q9C004 299 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 OR2AG1Q9H205 316 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 PKD2L2Q9NZM6 624 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 AKAP7Q9P0M2 348 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-221ENST00000483778 SCHIP1Q9P0W5 487 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-221ENST00000483778 DNPEPQ9ULA0 475 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 PCDHB11Q9Y5F2 797 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 PCDHGA3Q9Y5H0 932 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 SPO11Q9Y5K1 396 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 SSU72P8A0A1W2PR75 194 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 GRID2O43424 1007 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 AKR1B10O60218 316 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 NUAK1O60285 661 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 MT-CYBP00156 380 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-221ENST00000483778 CA4P22748 312 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 CSTF2P33240 577 aaKnown RBP eCLIP17.81■□□□□ 0.44
ATG4B-221ENST00000483778 DYNLT1P63172 113 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 PEX6Q13608 980 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 TMEM164Q5U3C3 297 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 ARHGAP22Q7Z5H3 698 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 TMC3Q7Z5M5 1100 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 ADGRG6Q86SQ4 1221 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 FAM129CQ86XR2 697 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
ATG4B-221ENST00000483778 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 AHCYL2Q96HN2 611 aaKnown RBP17.81■□□□□ 0.44
ATG4B-221ENST00000483778 OLFM3Q96PB7 478 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 SPATA16Q9BXB7 569 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 ZFYVE1Q9HBF4 777 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 APMAPQ9HDC9 416 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 SARS2Q9NP81 518 aaKnown RBP17.81■□□□□ 0.44
ATG4B-221ENST00000483778 UBP1Q9NZI7 540 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 SPTA1P02549 2419 aa17.81■□□□□ 0.44
ATG4B-221ENST00000483778 STMND1H3BQB6 276 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 APOL1O14791 398 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 ZW10O43264 779 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 MTX2O75431 263 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 SLC4A1P02730 911 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 LIFP15018 202 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 CD82P27701 267 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 MAPK9P45984 424 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 PPM1FP49593 454 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-221ENST00000483778 GPLD1P80108 840 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 ADCY2Q08462 1091 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 NOMO1Q15155 1222 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 CRTC3Q6UUV7 619 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 TIPARPQ7Z3E1 657 aaKnown RBP17.8■□□□□ 0.44
ATG4B-221ENST00000483778 NT5DC3Q86UY8 548 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 OR10G6Q8NH81 332 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 PLEKHG4BQ96PX9 1271 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 ADGRE3Q9BY15 652 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 DEF6Q9H4E7 631 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 NHEJ1Q9H9Q4 299 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-221ENST00000483778 KLC4Q9NSK0 619 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
ATG4B-221ENST00000483778 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF487B1APH4 448 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 B4E171 279 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 SLC28A2O43868 658 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 MTA2O94776 668 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 SLC25A14O95258 325 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-221ENST00000483778 KRT1P04264 644 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 ITGB2P05107 769 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 F3P13726 295 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 BPIP17213 487 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 CA5AP35218 305 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 TSPAN7P41732 249 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 MC2RQ01718 297 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 PLA2G4EQ3MJ16 856 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 WDR74Q6RFH5 385 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-221ENST00000483778 RFX6Q8HWS3 928 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF830Q96NB3 372 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-221ENST00000483778 DDA1Q9BW61 102 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 SLC25A51Q9H1U9 297 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 CARD9Q9H257 536 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 RMI1Q9H9A7 625 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 GLOD4Q9HC38 313 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 MAGEE1Q9HCI5 957 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 TRIM39Q9HCM9 518 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 BPIFA1Q9NP55 256 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 STARD5Q9NSY2 213 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF624Q9P2J8 865 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-221ENST00000483778 CPNE7Q9UBL6 633 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 KLHL3Q9UH77 587 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 PILRAQ9UKJ1 303 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF711Q9Y462 761 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 SLC30A1Q9Y6M5 507 aa17.79■□□□□ 0.44
ATG4B-221ENST00000483778 PMPCBO75439 489 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms