RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 TMPRSS15P98073 1019 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 BNC1Q01954 994 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 EFTUD2Q15029 972 aaKnown RBP eCLIP11.33□□□□□ -0.64e-6■■■■□ 25.8
PTPN18-212ENST00000483617 TEAD4Q15561 434 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 TEDDM1Q5T9Z0 273 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 KIAA0895LQ68EN5 471 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 NAXDQ8IW45 347 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 OR4L1Q8NH43 312 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 DCAKDQ8WVC6 231 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 RAB7BQ96AH8 199 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 ALKBH8Q96BT7 664 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 NSMCE3Q96MG7 304 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 TCF12Q99081 682 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 DHRS4Q9BTZ2 278 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 CNOT10Q9H9A5 744 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 IL21RQ9HBE5 538 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 TM9SF3Q9HD45 589 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 PKD2L2Q9NZM6 624 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 SERGEFQ9UGK8 458 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 SLC2A6Q9UGQ3 507 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 FNDC3AQ9Y2H6 1198 aaKnown RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 SPO11Q9Y5K1 396 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
PTPN18-212ENST00000483617 MYLKQ15746 1914 aa11.33□□□□□ -0.6
PTPN18-212ENST00000483617 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 H3BQF6 201 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 RNASEH2AO75792 299 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 PRKCGP05129 697 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 IGHV4-34P06331 123 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 ALPIP09923 528 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 NR1D1P20393 614 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 ITGALP20701 1170 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 HPDP32754 393 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 POLD2P49005 469 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TTPAP49638 278 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CSNK1EP49674 416 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 ACVR1Q04771 509 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 HLA-BQ31612 363 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 LYPLAL1Q5VWZ2 237 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 PACS1Q6VY07 963 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 PTAR1Q7Z6K3 402 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CNTN4Q8IWV2 1026 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 SRRM1Q8IYB3 904 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 UNC5BQ8IZJ1 945 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TTC30BQ8N4P2 665 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TLCD1Q96CP7 247 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TBATAQ96M53 351 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TSNARE1Q96NA8 513 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CAMK1GQ96NX5 476 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 MCCC1Q96RQ3 725 aaPredicted RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 FAM129BQ96TA1 746 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 OMDQ99983 421 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 ORAI3Q9BRQ5 295 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CDH19Q9H159 772 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 CCDC68Q9H2F9 335 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 FAM53CQ9NYF3 392 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 FBXO5Q9UKT4 447 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 PPM1HQ9ULR3 514 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 ZFHX4Q86UP3 3567 aa11.32□□□□□ -0.6
PTPN18-212ENST00000483617 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 CCDC162PA2VCL2 907 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 RGSL1A5PLK6 1076 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 LRRC72A6NJI9 287 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 A6NNZ2 444 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 CXorf49A8MYA2 514 aaPredicted RBP11.31□□□□□ -0.6
PTPN18-212ENST00000483617 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 TRIM49D1C9J1S8 452 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 POLR3GO15318 223 aaPredicted RBP11.31□□□□□ -0.6
PTPN18-212ENST00000483617 BUD23O43709 281 aaKnown RBP11.31□□□□□ -0.6
PTPN18-212ENST00000483617 HYAL3O43820 417 aaPredicted RBP11.31□□□□□ -0.6
PTPN18-212ENST00000483617 NDUFS3O75489 264 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 TRIM16O95361 564 aa11.31□□□□□ -0.6
PTPN18-212ENST00000483617 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms