RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RBFAQ8N0V3 343 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ARHGAP24Q8N264 748 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 AFAP1L2Q8N4X5 818 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 PAF1Q8N7H5 531 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SIDT2Q8NBJ9 832 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 OR2A12Q8NGT7 310 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ITFG1Q8TB96 612 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FRS2Q8WU20 508 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 LRRC3BQ96PB8 259 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ASB8Q9H765 288 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 MEAF6Q9HAF1 191 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ERVW-1Q9UQF0 538 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 DHRS7Q9Y394 339 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 SUPT7LO94864 414 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 CHRM3P20309 590 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 ACRV1P26436 265 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 CA5AP35218 305 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 RAP1GDS1P52306 607 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 COPAP53621 1224 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 NAA20P61599 178 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 DHCR24Q15392 516 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 TSNQ15631 228 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 Q6ZVU0 165 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 RPS27LQ71UM5 84 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 ACTRT2Q8TDY3 377 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 SMG7Q92540 1137 aaKnown RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 C1QTNF3Q9BXJ4 246 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-225ENST00000483495 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 RNF112Q9ULX5 631 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 TMCO1Q9UM00 188 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 SCN8AQ9UQD0 1980 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 GBF1Q92538 1859 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 CHD7Q9P2D1 2997 aa13.13□□□□□ -0.31
CPNE1-225ENST00000483495 E5RI56 91 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 STX16-NPEPL1H3BU86 382 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CDC7O00311 574 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 NEMP1O14524 444 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 STX16O14662 325 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHUKO15111 745 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 ECI2O75521 394 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CYP17A1P05093 508 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 UGT2B4P06133 528 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 FGF4P08620 206 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CISD3P0C7P0 127 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 POLR2EP19388 210 aaKnown RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CCND1P24385 295 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 PTSQ03393 145 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BTKQ06187 659 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHRNA6Q15825 494 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 DUSP6Q16828 381 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 GEN1Q17RS7 908 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 LRRC66Q68CR7 880 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHST14Q8NCH0 376 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 EEF1AKMT1Q8WVE0 214 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 LINGO1Q96FE5 620 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CLPBQ9H078 707 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BRD9Q9H8M2 597 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 TRAF6Q9Y4K3 522 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 NPEPPSL1A6NEC2 478 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BTN3A1O00481 513 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 TRIM24O15164 1050 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BNIP3LO60238 219 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 SUPT3HO75486 399 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 TM7SF2O76062 418 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 GFAPP14136 432 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 LHCGRP22888 699 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 PGM1P36871 562 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 POLR2LP62875 67 aaKnown RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 KCNC3Q14003 757 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 EML3Q32P44 896 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 ZDHHC20Q5W0Z9 365 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BRAT1Q6PJG6 821 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 GDPD4Q6W3E5 623 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 MACC1Q6ZN28 852 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHSY3Q70JA7 882 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CPNE9Q8IYJ1 553 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms