RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DNAJC28Q9NX36 388 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 KNL1Q8NG31 2342 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 FAM237BA0A1B0GVD1 139 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 BHMG1C9JSJ3 638 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 H7C0S8 307 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ARHGAP33O14559 1287 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 VAPBO95292 243 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 PGAM1P18669 254 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ACVR1Q04771 509 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 PTK2BQ14289 1009 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ANKRD20A4Q4UJ75 823 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 AFTPHQ6ULP2 937 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 CAPN12Q6ZSI9 719 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 TAS2R42Q7RTR8 314 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 SNX20Q7Z614 316 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 FBXO36Q8NEA4 188 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 BTN2A2Q8WVV5 523 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 TSACCQ96A04 125 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 WDR92Q96MX6 357 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 EBNA1BP2Q99848 306 aaKnown RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 IL21RQ9HBE5 538 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 RIMKLBQ9ULI2 386 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 PLXNB3Q9ULL4 1909 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 TOR1BO14657 336 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ARNTP27540 789 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 TEAD1P28347 426 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ATXN3P54252 364 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 CSRP2Q16527 193 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 HLA-BQ31612 363 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 KHDC1Q4VXA5 237 aaKnown RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 GPRC6AQ5T6X5 926 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 PDPK2PQ6A1A2 396 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 OTUD6BQ8N6M0 293 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 OR56A4Q8NGH8 313 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 PEX13Q92968 403 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 CCDC97Q96F63 343 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 COX14Q96I36 57 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 VPS35Q96QK1 796 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 GAREM1Q9H706 876 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 KLQ9UEF7 1012 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 ZC3H7BQ9UGR2 993 aaKnown RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.68■□□□□ 0.42
CPNE1-224ENST00000483359 TEX264Q9Y6I9 313 aa17.68■□□□□ 0.42
CPNE1-224ENST00000483359 EP300Q09472 2414 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-224ENST00000483359 MAGEB16A2A368 324 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 GFRA3O60609 400 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 SDC3O75056 442 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 USP1O94782 785 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 POLBP06746 335 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 SYPP08247 313 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 AKT1P31749 480 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 EIF2B5Q13144 721 aaKnown RBP17.67■□□□□ 0.42
CPNE1-224ENST00000483359 CRYMQ14894 314 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 PRR23CQ6ZRP0 262 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 LDB1Q86U70 411 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-224ENST00000483359 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 HID1Q8IV36 788 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 IFT20Q8IY31 132 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 PIANPQ8IYJ0 282 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 UNC5BQ8IZJ1 945 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 RBFAQ8N0V3 343 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 OR4L1Q8NH43 312 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 OR1E3Q8WZA6 343 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 C19orf43Q9BQ61 176 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 OR2AG1Q9H205 316 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
CPNE1-224ENST00000483359 ZCWPW2A0A1B0GU75 182 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 E7ESA3 106 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 PAMP19021 973 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 KELP23276 732 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 PSMA3P25788 255 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 ECHS1P30084 290 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 FOXN2P32314 431 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 CACNG1Q06432 222 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 ALG11Q2TAA5 492 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 AASDHQ4L235 1098 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 DCP2Q8IU60 420 aaKnown RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 GSPT2Q8IYD1 628 aaKnown RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 MINDY1Q8N5J2 469 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 EDEM2Q9BV94 578 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 TCEAL2Q9H3H9 227 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 CYP4F12Q9HCS2 524 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 NFU1Q9UMS0 254 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 PRKAB1Q9Y478 270 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 PRSS38A1L453 326 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 CEACAM5P06731 702 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 F7P08709 466 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 TGM1P22735 817 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 SEMA3AQ14563 771 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 FASTKD1Q53R41 847 aaKnown RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 KIAA0930Q6ICG6 404 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 UNC5AQ6ZN44 842 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 SERPINA9Q86WD7 417 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 NXPE1Q8N323 547 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 DTX3LQ8TDB6 740 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 LRRC39Q96DD0 335 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 FMO2Q99518 471 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 ELF4Q99607 663 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms