RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CACNG1Q06432 222 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 NFATC2Q13469 925 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ITGA9Q13797 1035 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 NFATC4Q14934 902 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 LONRF1Q17RB8 773 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 DUOXA1Q1HG43 343 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 KHDC1Q4VXA5 237 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 UBAP2Q5T6F2 1119 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ADAMTSL4Q6UY14 1074 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SERPINA9Q86WD7 417 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 PHYKPLQ8IUZ5 450 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 PIANPQ8IYJ0 282 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 MFSD2AQ8NA29 543 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 OR2I1PQ8NGU4 316 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 OR4L1Q8NH43 312 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 GLYATL1Q969I3 302 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 TSACCQ96A04 125 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 CDH19Q9H159 772 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 MARCH4Q9P2E8 410 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 NFKBIL1Q9UBC1 381 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 TMPRSS11EQ9UL52 423 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ANKRD6Q9Y2G4 727 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SNX11Q9Y5W9 270 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF292O60281 2723 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 ZCWPW2A0A1B0GU75 182 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 MAGEB16A2A368 324 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 TMEM202A6NGA9 273 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 EIF3HO15372 352 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 CD3EAPO15446 510 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 PIAS1O75925 651 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 ARNTP27540 789 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 HTR1BP28222 390 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 ACVR1Q04771 509 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 GRIK2Q13002 908 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 SF3A2Q15428 464 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 KIF19Q2TAC6 998 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 GPRC6AQ5T6X5 926 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF470Q6ECI4 717 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 TRMT10BQ6PF06 316 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 CRTC3Q6UUV7 619 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 TMEM135Q86UB9 458 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 HID1Q8IV36 788 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 GPR161Q8N6U8 529 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 UHMK1Q8TAS1 419 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 LRRC39Q96DD0 335 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 PDXPQ96GD0 296 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 WDR92Q96MX6 357 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 BOCQ9BWV1 1114 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 TEX101Q9BY14 249 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 OR2AG1Q9H205 316 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 IARS2Q9NSE4 1012 aaKnown RBP13.11□□□□□ -0.31
HDAC1-208ENST00000482310 DNAJC28Q9NX36 388 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 PRKAB1Q9Y478 270 aa13.11□□□□□ -0.31
HDAC1-208ENST00000482310 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 EP300Q09472 2414 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 H7C0S8 307 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 VILLO15195 856 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 SDC3O75056 442 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 ACSL3O95573 720 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 TTC4O95801 387 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PYGLP06737 847 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 RETP07949 1114 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 MSH3P20585 1137 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 ACRV1P26436 265 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PMLP29590 882 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PBLDP30039 288 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 TRIM23P36406 574 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 GNPDA1P46926 289 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 NXPH1P58417 271 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 KIAA1024LP59773 190 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 YPEL5P62699 121 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 IRX4P78413 519 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 MPP1Q00013 466 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 BNC1Q01954 994 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PTK2BQ14289 1009 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FZD2Q14332 565 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms