RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 BPIP17213 487 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ITIH1P19827 911 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 CD82P27701 267 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ALDH4A1P30038 563 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 CSF2RBP32927 897 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 HMGCLP35914 325 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 CXADRP78310 365 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 GPLD1P80108 840 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 XRCC4Q13426 336 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 GALNT3Q14435 633 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 PPP2R5EQ16537 467 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 TFDP3Q5H9I0 405 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ZFYVE27Q5T4F4 411 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 DOK6Q6PKX4 331 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 WDR74Q6RFH5 385 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 BBS12Q6ZW61 710 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 B4GALNT4Q76KP1 1039 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 RFX6Q8HWS3 928 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 TRAM1L1Q8N609 369 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 SLC37A2Q8TED4 501 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 MRFAP1L1Q96HT8 127 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 FCRL5Q96RD9 977 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 CCNL2Q96S94 520 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 SPRY4Q9C004 299 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 TRIM5Q9C035 493 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 UCK1Q9HA47 277 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 GRPEL1Q9HAV7 217 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 EPN1Q9Y6I3 576 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 ZFC3H1O60293 1989 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-207ENST00000482162 SMG1Q96Q15 3661 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 OR5K4A6NMS3 321 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 BTNL10A8MVZ5 291 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 HACD1B0YJ81 288 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 B4E171 279 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 AURKAO14965 403 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 GRID2O43424 1007 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ASMTLO95671 621 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 PIRTP0C851 137 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 JMJD7P0C870 316 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 THRAP10827 490 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 FGF3P11487 239 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 CCL4P13236 92 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 F3P13726 295 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 TSPAN7P41732 249 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF75DP51815 510 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 WNT3AP56704 352 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 COPS2P61201 443 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 UBE2IP63279 158 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 TMEM71Q6P5X7 295 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 FOXR1Q6PIV2 292 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 WASH2PQ6VEQ5 465 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ADGRG6Q86SQ4 1221 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF547Q8IVP9 402 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 KLHDC8BQ8IXV7 354 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF567Q8N184 647 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 BMPERQ8N8U9 685 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 KRT35Q92764 455 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 P3H4Q92791 437 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 USP7Q93009 1102 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 GLYATL1Q969I3 302 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 OXNAD1Q96HP4 312 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 MRGPRX2Q96LB1 330 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 PLEKHG4BQ96PX9 1271 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 VPS35Q96QK1 796 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 TRABDQ9H4I3 376 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 SUDS3Q9H7L9 328 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 IL26Q9NPH9 171 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 WASH6PQ9NQA3 447 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 PISDQ9UG56 409 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 SLC23A2Q9UGH3 650 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 FAM153AQ9UHL3 310 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 TRHDEQ9UKU6 1024 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 TFR2Q9UP52 801 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 SHOC2Q9UQ13 582 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 REXO2Q9Y3B8 237 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 PRKAB1Q9Y478 270 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 PCDHA3Q9Y5H8 950 aa9.61□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms