RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CRELD1Q96HD1 420 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 OR2M4Q96R27 311 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 FOXP3Q9BZS1 431 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 CCDC86Q9H6F5 360 aaKnown RBP11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 IL26Q9NPH9 171 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 TBC1D29Q9UFV1 150 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 PPP2R2CQ9Y2T4 447 aa11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 ARHGEF17Q96PE2 2063 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 SMG1Q96Q15 3661 aaKnown RBP11.3□□□□□ -0.6
RAPGEF1-207ENST00000481260 PRAMEF33A0A0G2JMD5 474 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 NTN3O00634 580 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 PPM1DO15297 605 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 MTSS1O43312 755 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 B4GAT1O43505 415 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 BRINP1O60477 761 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 RPLP0P05388 317 aaKnown RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 GP1BAP07359 652 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 PRSS56P0CW18 603 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 TPH1P17752 444 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 CXCR5P32302 372 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ACTR1BP42025 376 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 DUSP3P51452 185 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 OR1D5P58170 312 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ACTR1AP61163 376 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 E2F1Q01094 437 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 MPP3Q13368 585 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 OASLQ15646 514 aaKnown RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ISXQ2M1V0 245 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 C14orf28Q4W4Y0 310 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 KCTD11Q693B1 232 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 LVRNQ6Q4G3 990 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 C19orf48Q6RUI8 117 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 CHST15Q7LFX5 561 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 C17orf82Q86X59 251 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 PROSER1Q86XN7 944 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 SLC13A5Q86YT5 568 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 GALNT13Q8IUC8 556 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ZNF547Q8IVP9 402 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ARL14Q8N4G2 192 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 MYRIPQ8NFW9 859 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 GLYATL1Q969I3 302 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 VAT1Q99536 393 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 ENTPD2Q9Y5L3 495 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 MGAQ8IWI9 3026 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 KIF26BQ2KJY2 2108 aa11.29□□□□□ -0.6
RAPGEF1-207ENST00000481260 CCDC78A2IDD5 438 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 RGSL1A5PLK6 1076 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 C5orf60A6NFR6 353 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 LIASO43766 372 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 SLC25A14O95258 325 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 EPOP01588 193 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 CCDC175P0C221 793 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 HGFP14210 728 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 GRIA1P42261 906 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 CTSCP53634 463 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 GEMP55040 296 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 DCDC1P59894 354 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 TMPRSS15P98073 1019 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 B4GALNT1Q00973 533 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 CFHR1Q03591 330 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 ILF3Q12906 894 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 RPS6KA1Q15418 735 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 GLT6D1Q7Z4J2 308 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 TRAM1L1Q8N609 369 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 OR13C4Q8NGS5 318 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 SCG3Q8WXD2 468 aaKnown RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 PRR11Q96HE9 360 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 TBL1YQ9BQ87 522 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 FSD1LQ9BXM9 530 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 GSDMCQ9BYG8 508 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 FAM96AQ9H5X1 160 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 PRDM8Q9NQV8 689 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 KCTD5Q9NXV2 234 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 NFKBIL1Q9UBC1 381 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
RAPGEF1-207ENST00000481260 A6NCN8 305 aa11.27□□□□□ -0.61
RAPGEF1-207ENST00000481260 GRID2O43424 1007 aa11.27□□□□□ -0.61
RAPGEF1-207ENST00000481260 KRT86O43790 486 aa11.27□□□□□ -0.61
RAPGEF1-207ENST00000481260 NUAK1O60285 661 aa11.27□□□□□ -0.61
RAPGEF1-207ENST00000481260 SNX2O60749 519 aa11.27□□□□□ -0.61
RAPGEF1-207ENST00000481260 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms