RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TP73O15350 636 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 VEGFDO43915 354 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 MC4RP32245 332 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 RPL21P46778 160 aaKnown RBP19.55■□□□□ 0.72
LIME1-205ENST00000480139 CRADDP78560 199 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 TMPRSS15P98073 1019 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 BNIP3Q12983 259 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 UAP1L1Q3KQV9 507 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 LDLRAP1Q5SW96 308 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 KCTD16Q68DU8 428 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 DUPD1Q68J44 220 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 RBFAQ8N0V3 343 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 FSTL5Q8N475 847 aaPredicted RBP19.55■□□□□ 0.72
LIME1-205ENST00000480139 ULK4Q96C45 1275 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 ZNF778Q96MU6 729 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 LRRC61Q9BV99 259 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 ASB8Q9H765 288 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 CYP4F12Q9HCS2 524 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 MRPL40Q9NQ50 206 aaKnown RBP19.55■□□□□ 0.72
LIME1-205ENST00000480139 WHRNQ9P202 907 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 UTP11Q9Y3A2 253 aaKnown RBP19.55■□□□□ 0.72
LIME1-205ENST00000480139 SLC30A1Q9Y6M5 507 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 BPTFQ12830 3046 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 TDRD6O60522 2096 aaKnown RBP19.55■□□□□ 0.72
LIME1-205ENST00000480139 TRBV5-4A0A0C4DH59 114 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 NEMP2A6NFY4 417 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ESPNB1AK53 854 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 CCL22O00626 93 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 AQP9O43315 295 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A9O60656 530 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 DNAJC6O75061 913 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 FUCA1P04066 466 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A6P19224 532 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A1P22309 533 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A4P22310 534 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A3P35503 534 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A5P35504 534 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 GRK6P43250 576 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ARSDP51689 593 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ITGA8P53708 1063 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 CACNG1Q06432 222 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 DOK6Q6PKX4 331 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 AFTPHQ6ULP2 937 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ADGRG6Q86SQ4 1221 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 PIP4P1Q86T03 277 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 SLC25A45Q8N413 288 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 TRIM31Q9BZY9 425 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ZCCHC2Q9C0B9 1178 aaKnown RBP19.54■□□□□ 0.72
LIME1-205ENST00000480139 TCEAL2Q9H3H9 227 aaPredicted RBP19.54■□□□□ 0.72
LIME1-205ENST00000480139 CARS2Q9HA77 564 aaKnown RBP19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A7Q9HAW7 530 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A10Q9HAW8 530 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 UGT1A8Q9HAW9 530 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 TRNAU1APQ9NX07 287 aaKnown RBP19.54■□□□□ 0.72
LIME1-205ENST00000480139 SAMD15Q9P1V8 674 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ATXN10Q9UBB4 475 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 SLC2A6Q9UGQ3 507 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 ANAPC5Q9UJX4 755 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 SUFUQ9UMX1 484 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 TMEM98Q9Y2Y6 226 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 SNX24Q9Y343 169 aa19.54■□□□□ 0.72
LIME1-205ENST00000480139 FAM237BA0A1B0GVD1 139 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 CHUKO15111 745 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 SCAMP1O15126 338 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 GPR39O43194 453 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 NUAK1O60285 661 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 SDC3O75056 442 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 ASMTLO95671 621 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 POLD2P49005 469 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 DRG2P55039 364 aaKnown RBP19.53■□□□□ 0.72
LIME1-205ENST00000480139 MRPS25P82663 173 aaKnown RBP19.53■□□□□ 0.72
LIME1-205ENST00000480139 CBLBQ13191 982 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 ELOCQ15369 112 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 RSPO4Q2I0M5 234 aaPredicted RBP19.53■□□□□ 0.72
LIME1-205ENST00000480139 DNAJC21Q5F1R6 531 aaKnown RBP19.53■□□□□ 0.72
LIME1-205ENST00000480139 PRRT3Q5FWE3 981 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 GPRC6AQ5T6X5 926 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 GATAD2AQ86YP4 633 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 NAXDQ8IW45 347 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 NXPE1Q8N323 547 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 MPP5Q8N3R9 675 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 HEXDCQ8WVB3 486 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 HDAC10Q969S8 669 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 SIGLEC10Q96LC7 697 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 RTKNQ9BST9 563 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 SUDS3Q9H7L9 328 aaPredicted RBP19.53■□□□□ 0.72
LIME1-205ENST00000480139 UCKL1Q9NWZ5 548 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 CRLS1Q9UJA2 301 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 DMXL1Q9Y485 3027 aa19.53■□□□□ 0.72
LIME1-205ENST00000480139 CCDC78A2IDD5 438 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 CCDC162PA2VCL2 907 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 LMO7DNF2Z398 122 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 TPP1O14773 563 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 CTSEP14091 401 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 FOXN2P32314 431 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 CA5AP35218 305 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 PRAMEP78395 509 aa19.52■□□□□ 0.72
LIME1-205ENST00000480139 TMEM115Q12893 351 aaPredicted RBP19.52■□□□□ 0.72
LIME1-205ENST00000480139 CALCOCO2Q13137 446 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms