RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 EGFL6Q8IUX8 553 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 HDAC10Q969S8 669 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 COL21A1Q96P44 957 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 MNTQ99583 582 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 KIFC1Q9BW19 673 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 GBA3Q9H227 469 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 GDAP2Q9NXN4 497 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 GTF2IRD1Q9UHL9 959 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 H3BNH8 94 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 GRIN3BO60391 1043 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 NOS1APO75052 506 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 TIPRLO75663 272 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 OR6A2O95222 327 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 SERPINA3P01011 423 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 GNRH1P01148 92 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 HLA-DPB1P04440 258 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 CD2P06729 351 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 NR2F1P10589 423 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 ALDH4A1P30038 563 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 TAS2R39P59534 338 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 TXNL4AP83876 142 aaKnown RBP6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 PLIN5Q00G26 463 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 TUSC3Q13454 348 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 C15orf59Q2T9L4 293 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 FBXO42Q6P3S6 717 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF773Q6PK81 442 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 FRMD7Q6ZUT3 714 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 PTCHD4Q6ZW05 846 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 C10orf53Q8N6V4 93 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 NAT8LQ8N9F0 302 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 SEMA4DQ92854 862 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 HPS1Q92902 700 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 USP7Q93009 1102 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 PRICKLE1Q96MT3 831 aaPredicted RBP6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 COPS4Q9BT78 406 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 MOCS1Q9NZB8 636 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 SALL4Q9UJQ4 1053 aa6.12□□□□□ -1.43
PRPF4B-205ENST00000480058 SMIM22K7EJ46 135 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 MATN3O15232 486 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ENO2P09104 434 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 IMPDH1P20839 514 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 KELP23276 732 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CHRNA5P30532 468 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 NDST2P52849 883 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CLCQ05315 142 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PWP1Q13610 501 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HSDL1Q3SXM5 330 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF311Q5JNZ3 666 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HLA-DQA1Q5Y7H0 255 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 LLGL2Q6P1M3 1020 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FAM35AQ86V20 835 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 LINC00116Q8NCU8 138 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FAR1Q8WVX9 515 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SOCS4Q8WXH5 440 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 RIT1Q92963 219 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PPCDCQ96CD2 204 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 MARK4Q96L34 752 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 LGMNQ99538 433 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 C1QTNF1Q9BXJ1 281 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TLE6Q9H808 572 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 MARCH7Q9H992 704 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 KLHL1Q9NR64 748 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 MED11Q9P086 117 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ITM2AO43736 263 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 C4BPAP04003 597 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FABP3P05413 133 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ETS2P15036 469 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SOX11P35716 441 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CDH8P55286 799 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 GNG2P59768 71 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PITPNAQ00169 270 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FOXD4Q12950 439 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 MED22Q15528 200 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF404Q494X3 552 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TSTD2Q5T7W7 516 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HECTD2Q5U5R9 776 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 GALNT13Q8IUC8 556 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FSTL5Q8N475 847 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PIH1D2Q8WWB5 315 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 NARS2Q96I59 477 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 NSMCE3Q96MG7 304 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ELP3Q9H9T3 547 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SIX2Q9NPC8 291 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 STOX2Q9P2F5 926 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FAM50BQ9Y247 325 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PCDHGB7Q9Y5F8 929 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 A0A0X1KG70 313 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ILVBLA1L0T0 632 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SLC15A5A6NIM6 579 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FMO4P31512 558 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CRATP43155 626 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PTPN5P54829 565 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 INHBEP58166 350 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CXCL9Q07325 125 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 IL17AQ16552 155 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SYT16Q17RD7 645 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms