RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TSPAN9O75954 239 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 NDST3O95803 873 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 NAGAP17050 411 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 RBL1P28749 1068 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 RARRES1P49788 294 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 STILQ15468 1287 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 PPM1JQ5JR12 505 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 ZYG11AQ6WRX3 759 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 CDKL3Q8IVW4 592 aaPredicted RBP13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 FAM109AQ8N4B1 249 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 ARFGAP1Q8N6T3 406 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 OR6F1Q8NGZ6 308 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 JPH3Q8WXH2 748 aaPredicted RBP13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 RDH12Q96NR8 316 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 VPS35Q96QK1 796 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 DSN1Q9H410 356 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 NMRAL1Q9HBL8 299 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 NAALAD2Q9Y3Q0 740 aa13.09□□□□□ -0.31
CNKSR3-204ENST00000479339 EYSQ5T1H1 3165 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 SHOXO15266 292 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 TSPAN1O60635 241 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 NDUFS2O75306 463 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 MFN2O95140 757 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 LYPLA2O95372 231 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 CHRNGP07510 517 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 SNRPB2P08579 225 aaKnown RBP13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 HSD17B1P14061 328 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 SPRP35270 261 aaPredicted RBP13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 GATMP50440 423 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 CLCNKBP51801 687 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 SLC13A2Q13183 592 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 SEMA5AQ13591 1074 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 GALNT3Q14435 633 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 ATAD3CQ5T2N8 411 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 CCDC103Q8IW40 242 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 GALNT12Q8IXK2 581 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 TBC1D21Q8IYX1 336 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 PSMA8Q8TAA3 256 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 DYNC2LI1Q8TCX1 351 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 HDAC10Q969S8 669 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 MARVELD3Q96A59 401 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 CEP170P1Q96L14 293 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 B3GNT4Q9C0J1 378 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 TM9SF3Q9HD45 589 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 ACTR3BQ9P1U1 418 aa13.08□□□□□ -0.31
CNKSR3-204ENST00000479339 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 TOR1BO14657 336 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 GRM6O15303 877 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 TMCC2O75069 709 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 C4BPAP04003 597 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 JUNP05412 331 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 UMPSP11172 480 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ELK4P28324 431 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 AXLP30530 894 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 LRPAP1P30533 357 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 DDOSTP39656 456 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 AP2S1P53680 142 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 EPS8Q12929 822 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 FASTKQ14296 549 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 COL19A1Q14993 1142 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ACOX1Q15067 660 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF668Q96K58 619 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 HOPXQ9BPY8 73 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 TMEM246Q9BRR3 403 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 SLC7A5P2Q9GIP4 190 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 NSUN3Q9H649 340 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 UBE2ZQ9H832 354 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 DDX28Q9NUL7 540 aaKnown RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 ABCD2Q9UBJ2 740 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
CNKSR3-204ENST00000479339 CCDC78A2IDD5 438 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF99A8MXY4 864 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 NRP2O60462 931 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 SNAP29O95721 258 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 KRT19P08727 400 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TRAPPC2P0DI81 140 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TRAPPC2BP0DI82 140 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 DNAJB1P25685 340 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms